RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 FASTKD5Q7L8L6 764 aaKnown RBP8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 DZIP1Q86YF9 867 aaKnown RBP8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 SLC17A8Q8NDX2 589 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 KCNH4Q9UQ05 1017 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 LOC285556D6RIA3 1793 aa8.33□□□□□ -1.08
RTFDC1-206ENST00000477485 PTPRCP08575 1304 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 KIF16BQ96L93 1317 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 TRIM75PA6NK02 468 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 INHAP05111 366 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 FGFR2P21802 821 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 FLT3LGP49771 235 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 RGS3P49796 1198 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 NOL9Q5SY16 702 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 ZFPM1Q8IX07 1006 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 MRPL50Q8N5N7 158 aaKnown RBP8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 DEFB118Q96PH6 123 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 ABCF2Q9UG63 623 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 ZNF112Q9UJU3 913 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
RTFDC1-206ENST00000477485 A0A0G2JLL6 359 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 CXCL11O14625 94 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 ZBTB7BO15156 539 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 SGPL1O95470 568 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 BCRP11274 1271 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 MOGSQ13724 837 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 GPAT2Q6NUI2 795 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 PRRT2Q7Z6L0 340 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 CCDC84Q86UT8 332 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 ANKRD13CQ8N6S4 541 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 COA7Q96BR5 231 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 DENND2AQ9ULE3 1009 aa8.31□□□□□ -1.08
RTFDC1-206ENST00000477485 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 DLL1O00548 723 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 SLURP2P0DP57 97 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 PTPRAP18433 802 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 BTDP43251 543 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 PHKA1P46020 1223 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 C7orf61Q8IZ16 206 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 ZGPATQ8N5A5 531 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 LRCH3Q96II8 777 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 PAWRQ96IZ0 340 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 SMC4Q9NTJ3 1288 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 PLXNB2O15031 1838 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 FRMPD3Q5JV73 1810 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 MAST2Q6P0Q8 1798 aa8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 MYO5AQ9Y4I1 1855 aaKnown RBP8.3□□□□□ -1.08
RTFDC1-206ENST00000477485 SZT2Q5T011 3432 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 DDTLA6NHG4 134 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 ENTPD3O75355 529 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 ADORA1P30542 326 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 RFX5P48382 616 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 TREML2Q5T2D2 321 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 DIS3LQ8TF46 1054 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 SSH1Q8WYL5 1049 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 ZMYND8Q9ULU4 1186 aaPredicted RBP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 PA2G4Q9UQ80 394 aaKnown RBP8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 AFG3L2Q9Y4W6 797 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 FOCADQ5VW36 1801 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
RTFDC1-206ENST00000477485 ATRNL1Q5VV63 1379 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 PHF20L1A8MW92 1017 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 SOX1O00570 391 aaPredicted RBP8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 SEMA3EO15041 775 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 CTNND1O60716 968 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 ATXN8OSP0DMR3 200 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 SYN1P17600 705 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 GORABQ5T7V8 394 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 SPTY2D1Q68D10 685 aaPredicted RBP8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 SH3BP5LQ7L8J4 393 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 NECAB2Q7Z6G3 386 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 UBE2Q1Q7Z7E8 422 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 IDI2Q9BXS1 227 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 DDX4Q9NQI0 724 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 AGTPBP1Q9UPW5 1226 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 U3KPZ7 1027 aaPredicted RBP8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 MYH1P12882 1939 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
RTFDC1-206ENST00000477485 SIPA1L1O43166 1804 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 A0A1W2PPC1 479 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 CIAO1O76071 339 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 HMGCRP04035 888 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 IL15P40933 162 aaPredicted RBP8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 HMGCS2P54868 508 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 SPP2Q13103 211 aa8.27□□□□□ -1.09
RTFDC1-206ENST00000477485 PABPC4Q13310 644 aaKnown RBP eCLIP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 1511.4 ms