RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 NME2P22392 152 aa7.74□□□□□ -1.17
UBR3-209ENST00000477461 ZNF574Q6ZN55 896 aaPredicted RBP7.74□□□□□ -1.17
UBR3-209ENST00000477461 C3orf58Q8NDZ4 430 aa7.74□□□□□ -1.17
UBR3-209ENST00000477461 OSBPL7Q9BZF2 842 aa7.74□□□□□ -1.17
UBR3-209ENST00000477461 PAK6Q9NQU5 681 aaPredicted RBP7.74□□□□□ -1.17
UBR3-209ENST00000477461 PAGE1O75459 146 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 NEFMP07197 916 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 TXKP42681 527 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 SPRED2Q7Z698 418 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 ZSCAN29Q8IWY8 852 aaPredicted RBP7.73□□□□□ -1.17
UBR3-209ENST00000477461 PLD6Q8N2A8 252 aaKnown RBP7.73□□□□□ -1.17
UBR3-209ENST00000477461 ISL2Q96A47 359 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 NECAB3Q96P71 396 aaPredicted RBP7.73□□□□□ -1.17
UBR3-209ENST00000477461 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 PCOLCE2Q9UKZ9 415 aa7.73□□□□□ -1.17
UBR3-209ENST00000477461 DCDC2CA8MYV0 355 aa7.72□□□□□ -1.17
UBR3-209ENST00000477461 ZC3H12AQ5D1E8 599 aaKnown RBP7.72□□□□□ -1.17
UBR3-209ENST00000477461 PPM1JQ5JR12 505 aa7.72□□□□□ -1.17
UBR3-209ENST00000477461 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.72□□□□□ -1.17
UBR3-209ENST00000477461 BCL7CQ8WUZ0 217 aaPredicted RBP7.72□□□□□ -1.17
UBR3-209ENST00000477461 FMNL2Q96PY5 1086 aa7.72□□□□□ -1.17
UBR3-209ENST00000477461 SLC5A6Q9Y289 635 aa7.72□□□□□ -1.17
UBR3-209ENST00000477461 U3KQE9 123 aa7.72□□□□□ -1.17
UBR3-209ENST00000477461 BMP6P22004 513 aa7.71□□□□□ -1.18
UBR3-209ENST00000477461 HNRNPUQ00839 825 aaKnown RBP eCLIP7.71□□□□□ -1.18
UBR3-209ENST00000477461 C12orf40Q86WS4 652 aa7.71□□□□□ -1.18
UBR3-209ENST00000477461 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
UBR3-209ENST00000477461 EMILIN2Q9BXX0 1053 aa7.71□□□□□ -1.18
UBR3-209ENST00000477461 PICK1Q9NRD5 415 aa7.71□□□□□ -1.18
UBR3-209ENST00000477461 ENC1O14682 589 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 GSTT1P30711 240 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 CD96P40200 585 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 ZNF252P-AS1Q0IIN9 211 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 RASIP1Q5U651 963 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 TOP6BLQ8N6T0 577 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 DUSP23Q9BVJ7 150 aa7.7□□□□□ -1.18
UBR3-209ENST00000477461 PLCL1Q15111 1095 aa7.69□□□□□ -1.18
UBR3-209ENST00000477461 RNF214Q8ND24 703 aa7.69□□□□□ -1.18
UBR3-209ENST00000477461 AGBL5Q8NDL9 886 aa7.69□□□□□ -1.18
UBR3-209ENST00000477461 NETO1Q8TDF5 533 aa7.69□□□□□ -1.18
UBR3-209ENST00000477461 ASB16Q96NS5 453 aa7.69□□□□□ -1.18
UBR3-209ENST00000477461 ERVK-24P63145 666 aa7.68□□□□□ -1.18
UBR3-209ENST00000477461 FMR1Q06787 632 aaKnown RBP eCLIP7.68□□□□□ -1.18
UBR3-209ENST00000477461 CBLL1Q75N03 491 aa7.68□□□□□ -1.18
UBR3-209ENST00000477461 UBE3DQ7Z6J8 389 aa7.68□□□□□ -1.18
UBR3-209ENST00000477461 CEP44Q9C0F1 390 aa7.68□□□□□ -1.18
UBR3-209ENST00000477461 CELA3AP09093 270 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 CD8BP10966 210 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 ITIH2P19823 946 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 ATP2B2Q01814 1243 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 ALG1LQ6GMV1 187 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 PCDHA4Q9UN74 947 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 SAMM50Q9Y512 469 aa7.67□□□□□ -1.18
UBR3-209ENST00000477461 LLGL2Q6P1M3 1020 aa7.66□□□□□ -1.18
UBR3-209ENST00000477461 WFDC3Q8IUB2 231 aa7.66□□□□□ -1.18
UBR3-209ENST00000477461 FBF1Q8TES7 1133 aa7.66□□□□□ -1.18
UBR3-209ENST00000477461 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
UBR3-209ENST00000477461 P4HBP07237 508 aaKnown RBP7.65□□□□□ -1.18
UBR3-209ENST00000477461 USP17L7P0C7H9 530 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 OXCT1P55809 520 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 PTPN11Q06124 597 aaPredicted RBP7.65□□□□□ -1.18
UBR3-209ENST00000477461 KCNA1Q09470 495 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 AOC3Q16853 763 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 ZNF792Q3KQV3 632 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 STK11IPQ8N1F8 1099 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 HEXIM2Q96MH2 286 aaKnown RBP7.65□□□□□ -1.18
UBR3-209ENST00000477461 SRCIN1Q9C0H9 1055 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 SPG7Q9UQ90 795 aa7.65□□□□□ -1.18
UBR3-209ENST00000477461 TRIM37O94972 964 aa7.64□□□□□ -1.19
UBR3-209ENST00000477461 LDHBP07195 334 aaKnown RBP7.64□□□□□ -1.19
UBR3-209ENST00000477461 INPP5AQ14642 412 aa7.64□□□□□ -1.19
UBR3-209ENST00000477461 PCNX4Q63HM2 1172 aa7.64□□□□□ -1.19
UBR3-209ENST00000477461 CDC37L1Q7L3B6 337 aa7.64□□□□□ -1.19
UBR3-209ENST00000477461 C12orf49Q9H741 205 aa7.64□□□□□ -1.19
UBR3-209ENST00000477461 CACNA2D2Q9NY47 1150 aa7.64□□□□□ -1.19
UBR3-209ENST00000477461 GIPC1O14908 333 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 NTF4P34130 210 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 LRRC14Q15048 493 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 ELMO3Q96BJ8 720 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 ASIC4Q96FT7 647 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 PRDM10Q9NQV6 1147 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 RNF19AQ9NV58 838 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 VAV3Q9UKW4 847 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 PPM1HQ9ULR3 514 aa7.63□□□□□ -1.19
UBR3-209ENST00000477461 TTF2Q9UNY4 1162 aaKnown RBP7.63□□□□□ -1.19
UBR3-209ENST00000477461 RBAK-RBAKDNI3L0D1 243 aa7.62□□□□□ -1.19
UBR3-209ENST00000477461 CEACAM5P06731 702 aa7.62□□□□□ -1.19
UBR3-209ENST00000477461 IFI16Q16666 785 aaKnown RBP7.62□□□□□ -1.19
UBR3-209ENST00000477461 PI4K2BQ8TCG2 481 aa7.62□□□□□ -1.19
UBR3-209ENST00000477461 MISP3Q96FF7 219 aa7.62□□□□□ -1.19
UBR3-209ENST00000477461 HRASLS5Q96KN8 279 aa7.62□□□□□ -1.19
UBR3-209ENST00000477461 PRAMEF27A3QJZ7 478 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 ITGB5P18084 799 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 CDK8P49336 464 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 PRKCQQ04759 706 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 RING1Q06587 406 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 ZBTB37Q5TC79 503 aa7.61□□□□□ -1.19
UBR3-209ENST00000477461 OGFOD2Q6N063 350 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms