RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ARPP21Q9UBL0 812 aaPredicted RBP34.12■■■■□ 3.05
VEGFA-211ENST00000476772 LARGE1O95461 756 aa34.12■■■■□ 3.05
VEGFA-211ENST00000476772 RASSF7Q02833 373 aa34.12■■■■□ 3.05
VEGFA-211ENST00000476772 STK11IPQ8N1F8 1099 aa34.12■■■■□ 3.05
VEGFA-211ENST00000476772 NKX2-3Q8TAU0 364 aa34.12■■■■□ 3.05
VEGFA-211ENST00000476772 TPCN1Q9ULQ1 816 aa34.12■■■■□ 3.05
VEGFA-211ENST00000476772 PSMD14O00487 310 aa34.11■■■■□ 3.05
VEGFA-211ENST00000476772 MCM5P33992 734 aa34.11■■■■□ 3.05
VEGFA-211ENST00000476772 MFSD6Q6ZSS7 791 aa34.11■■■■□ 3.05
VEGFA-211ENST00000476772 MCM9Q9NXL9 1143 aa34.11■■■■□ 3.05
VEGFA-211ENST00000476772 B4E1Z4 1266 aa34.1■■■■□ 3.05
VEGFA-211ENST00000476772 ANTXR2P58335 489 aa34.1■■■■□ 3.05
VEGFA-211ENST00000476772 SBK1Q52WX2 424 aa34.1■■■■□ 3.05
VEGFA-211ENST00000476772 RSBN1LQ6PCB5 846 aaPredicted RBP34.1■■■■□ 3.05
VEGFA-211ENST00000476772 MAPKAPK5Q8IW41 473 aa34.1■■■■□ 3.05
VEGFA-211ENST00000476772 MRIQ9BWK5 157 aa34.1■■■■□ 3.05
VEGFA-211ENST00000476772 FOCADQ5VW36 1801 aa34.1■■■■□ 3.05
VEGFA-211ENST00000476772 PRC1O43663 620 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 VIL1P09327 827 aaKnown RBP34.09■■■■□ 3.05
VEGFA-211ENST00000476772 USP17L8P0C7I0 530 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 CYP2D6P10635 497 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 FGD1P98174 961 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 HDLBPQ00341 1268 aaKnown RBP34.09■■■■□ 3.05
VEGFA-211ENST00000476772 ZSCAN31Q96LW9 406 aaPredicted RBP34.09■■■■□ 3.05
VEGFA-211ENST00000476772 RNF41Q9H4P4 317 aaPredicted RBP34.09■■■■□ 3.05
VEGFA-211ENST00000476772 DDX60LQ5H9U9 1706 aaKnown RBP34.09■■■■□ 3.05
VEGFA-211ENST00000476772 MYO3BQ8WXR4 1341 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 EVX2Q03828 476 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 AGXT2Q9BYV1 514 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 CNNM2Q9H8M5 875 aa34.09■■■■□ 3.05
VEGFA-211ENST00000476772 ME3Q16798 604 aa34.08■■■■□ 3.05
VEGFA-211ENST00000476772 APOBEC3HQ6NTF7 200 aaKnown RBP34.08■■■■□ 3.05
VEGFA-211ENST00000476772 CYB5R4Q7L1T6 521 aa34.08■■■■□ 3.05
VEGFA-211ENST00000476772 JDP2Q8WYK2 163 aa34.08■■■■□ 3.05
VEGFA-211ENST00000476772 BRF1Q92994 677 aa34.08■■■■□ 3.05
VEGFA-211ENST00000476772 ZDHHC15Q96MV8 337 aa34.08■■■■□ 3.05
VEGFA-211ENST00000476772 KRT23Q9C075 422 aa34.07■■■■□ 3.04
VEGFA-211ENST00000476772 SH2B1Q9NRF2 756 aaPredicted RBP34.07■■■■□ 3.04
VEGFA-211ENST00000476772 FLT1P17948 1338 aa34.07■■■■□ 3.04
VEGFA-211ENST00000476772 WDR19Q8NEZ3 1342 aa34.07■■■■□ 3.04
VEGFA-211ENST00000476772 DDIT3P35638 169 aa34.06■■■■□ 3.04
VEGFA-211ENST00000476772 TOMM22Q9NS69 142 aa34.06■■■■□ 3.04
VEGFA-211ENST00000476772 SERPINA10Q9UK55 444 aa34.06■■■■□ 3.04
VEGFA-211ENST00000476772 PCDHAC2Q9Y5I4 1007 aa34.06■■■■□ 3.04
VEGFA-211ENST00000476772 SLC4A8Q2Y0W8 1093 aa34.06■■■■□ 3.04
VEGFA-211ENST00000476772 RRP12Q5JTH9 1297 aaKnown RBP34.06■■■■□ 3.04
VEGFA-211ENST00000476772 USP40Q9NVE5 1235 aa34.06■■■■□ 3.04
VEGFA-211ENST00000476772 ECM29Q5VYK3 1845 aa34.05■■■■□ 3.04
VEGFA-211ENST00000476772 PRELPP51888 382 aa34.05■■■■□ 3.04
VEGFA-211ENST00000476772 CXCL9Q07325 125 aa34.05■■■■□ 3.04
VEGFA-211ENST00000476772 CDC42EP5Q6NZY7 148 aa34.05■■■■□ 3.04
VEGFA-211ENST00000476772 GMLQ99445 158 aa34.05■■■■□ 3.04
VEGFA-211ENST00000476772 SYT17Q9BSW7 474 aa34.05■■■■□ 3.04
VEGFA-211ENST00000476772 KDM4AO75164 1064 aa34.04■■■■□ 3.04
VEGFA-211ENST00000476772 RBM5P52756 815 aaKnown RBP eCLIP34.04■■■■□ 3.041e-9■□□□□ 9.1
VEGFA-211ENST00000476772 C12orf60Q5U649 245 aa34.04■■■■□ 3.04
VEGFA-211ENST00000476772 FBXL16Q8N461 479 aa34.04■■■■□ 3.04
VEGFA-211ENST00000476772 GPHNQ9NQX3 736 aaPredicted RBP34.04■■■■□ 3.04
VEGFA-211ENST00000476772 SAP30BPQ9UHR5 308 aaKnown RBP34.04■■■■□ 3.04
VEGFA-211ENST00000476772 INTS4Q96HW7 963 aaKnown RBP34.03■■■■□ 3.04
VEGFA-211ENST00000476772 ZBTB12Q9Y330 459 aaPredicted RBP34.03■■■■□ 3.04
VEGFA-211ENST00000476772 MYH1P12882 1939 aa34.03■■■■□ 3.04
VEGFA-211ENST00000476772 ZSWIM5Q9P217 1185 aa34.03■■■■□ 3.04
VEGFA-211ENST00000476772 WDHD1O75717 1129 aaPredicted RBP34.02■■■■□ 3.04
VEGFA-211ENST00000476772 FGRP09769 529 aa34.02■■■■□ 3.04
VEGFA-211ENST00000476772 APOBRQ0VD83 1088 aa34.02■■■■□ 3.04
VEGFA-211ENST00000476772 ST3GAL1Q11201 340 aa34.02■■■■□ 3.04
VEGFA-211ENST00000476772 CCDC83Q8IWF9 413 aa34.02■■■■□ 3.04
VEGFA-211ENST00000476772 AMOTL1Q8IY63 956 aa34.02■■■■□ 3.04
VEGFA-211ENST00000476772 PCP11498 1178 aaKnown RBP34.01■■■■□ 3.04
VEGFA-211ENST00000476772 CIAPIN1Q6FI81 312 aa34.01■■■■□ 3.04
VEGFA-211ENST00000476772 NECAB1Q8N987 351 aa34.01■■■■□ 3.04
VEGFA-211ENST00000476772 POLR3DP05423 398 aaPredicted RBP34■■■■□ 3.03
VEGFA-211ENST00000476772 SLC3A2P08195 630 aaKnown RBP34■■■■□ 3.03
VEGFA-211ENST00000476772 PICALMQ13492 652 aa34■■■■□ 3.03
VEGFA-211ENST00000476772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34■■■■□ 3.032e-6■□□□□ 9
VEGFA-211ENST00000476772 ROBO3Q96MS0 1386 aa34■■■■□ 3.03
VEGFA-211ENST00000476772 CFAP100Q494V2 611 aa33.99■■■■□ 3.03
VEGFA-211ENST00000476772 DDX4Q9NQI0 724 aaKnown RBP33.99■■■■□ 3.03
VEGFA-211ENST00000476772 PRDM1O75626 825 aa33.99■■■■□ 3.03
VEGFA-211ENST00000476772 STK3Q13188 491 aa33.99■■■■□ 3.03
VEGFA-211ENST00000476772 AGBL3Q8NEM8 1001 aa33.99■■■■□ 3.03
VEGFA-211ENST00000476772 CHMP5Q9NZZ3 219 aa33.99■■■■□ 3.03
VEGFA-211ENST00000476772 PLCD1P51178 756 aa33.98■■■■□ 3.03
VEGFA-211ENST00000476772 ESR2Q92731 530 aa33.98■■■■□ 3.03
VEGFA-211ENST00000476772 TMEM87BQ96K49 555 aa33.98■■■■□ 3.03
VEGFA-211ENST00000476772 CWC22Q9HCG8 908 aaKnown RBP33.98■■■■□ 3.03
VEGFA-211ENST00000476772 SH2B2O14492 632 aaPredicted RBP33.97■■■■□ 3.03
VEGFA-211ENST00000476772 ARHGAP27Q6ZUM4 889 aa33.97■■■■□ 3.03
VEGFA-211ENST00000476772 HDAC9Q9UKV0 1011 aa33.97■■■■□ 3.03
VEGFA-211ENST00000476772 ORC4O43929 436 aa33.96■■■■□ 3.03
VEGFA-211ENST00000476772 DYNLL2Q96FJ2 89 aa33.96■■■■□ 3.03
VEGFA-211ENST00000476772 ANGEL1Q9UNK9 670 aaKnown RBP33.96■■■■□ 3.03
VEGFA-211ENST00000476772 PDE4BQ07343 736 aa33.96■■■■□ 3.03
VEGFA-211ENST00000476772 IGDCC4Q8TDY8 1250 aa33.96■■■■□ 3.03
VEGFA-211ENST00000476772 CIZ1Q9ULV3 898 aaPredicted RBP33.96■■■■□ 3.03
VEGFA-211ENST00000476772 EVCP57679 992 aa33.95■■■■□ 3.03
VEGFA-211ENST00000476772 NFIAQ12857 509 aa33.95■■■■□ 3.03
VEGFA-211ENST00000476772 TNIP1Q15025 636 aa33.95■■■■□ 3.03
VEGFA-211ENST00000476772 OGFOD1Q8N543 542 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms