RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 SNX11Q9Y5W9 270 aa9.51□□□□□ -0.89
NUP58-209ENST00000476553 TTLL4Q14679 1199 aa9.5□□□□□ -0.89
NUP58-209ENST00000476553 USPL1Q5W0Q7 1092 aa9.5□□□□□ -0.89
NUP58-209ENST00000476553 LILRA6Q6PI73 481 aa9.5□□□□□ -0.89
NUP58-209ENST00000476553 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
NUP58-209ENST00000476553 LRRC56Q8IYG6 542 aaPredicted RBP9.5□□□□□ -0.89
NUP58-209ENST00000476553 ABCB6Q9NP58 842 aa9.5□□□□□ -0.89
NUP58-209ENST00000476553 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
NUP58-209ENST00000476553 SLFN14P0C7P3 912 aa9.49□□□□□ -0.89
NUP58-209ENST00000476553 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
NUP58-209ENST00000476553 KRTAP9-3Q9BYQ3 159 aa9.49□□□□□ -0.89
NUP58-209ENST00000476553 CTNND2Q9UQB3 1225 aa9.49□□□□□ -0.89
NUP58-209ENST00000476553 NEFMP07197 916 aa9.48□□□□□ -0.89
NUP58-209ENST00000476553 ITIH2P19823 946 aa9.48□□□□□ -0.89
NUP58-209ENST00000476553 RPS26P11Q5JNZ5 115 aaPredicted RBP9.48□□□□□ -0.89
NUP58-209ENST00000476553 SIAH1Q8IUQ4 282 aa9.48□□□□□ -0.89
NUP58-209ENST00000476553 ZSCAN18Q8TBC5 510 aaPredicted RBP9.48□□□□□ -0.89
NUP58-209ENST00000476553 LIN37Q96GY3 246 aaPredicted RBP9.48□□□□□ -0.89
NUP58-209ENST00000476553 TTBK1Q5TCY1 1321 aaPredicted RBP9.48□□□□□ -0.89
NUP58-209ENST00000476553 PRRG2O14669 202 aa9.47□□□□□ -0.89
NUP58-209ENST00000476553 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
NUP58-209ENST00000476553 TOP6BLQ8N6T0 577 aa9.47□□□□□ -0.89
NUP58-209ENST00000476553 EHD4Q9H223 541 aa9.47□□□□□ -0.89
NUP58-209ENST00000476553 PCOLCE2Q9UKZ9 415 aa9.47□□□□□ -0.89
NUP58-209ENST00000476553 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 TMEM88BA6NKF7 163 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 FKBP4Q02790 459 aaKnown RBP eCLIP9.46□□□□□ -0.9
NUP58-209ENST00000476553 FAAP100Q0VG06 881 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 FAM214BQ7L5A3 538 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 ASB11Q8WXH4 323 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 HEXIM2Q96MH2 286 aaKnown RBP9.46□□□□□ -0.9
NUP58-209ENST00000476553 NPHS2Q9NP85 383 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 RAPGEFL1Q9UHV5 662 aa9.46□□□□□ -0.9
NUP58-209ENST00000476553 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
NUP58-209ENST00000476553 ZC3H12CQ9C0D7 883 aaKnown RBP9.45□□□□□ -0.9
NUP58-209ENST00000476553 LMCD1Q9NZU5 365 aa9.45□□□□□ -0.9
NUP58-209ENST00000476553 RNGTTO60942 597 aaKnown RBP9.44□□□□□ -0.9
NUP58-209ENST00000476553 KRT1P04264 644 aa9.44□□□□□ -0.9
NUP58-209ENST00000476553 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
NUP58-209ENST00000476553 ZP2Q05996 745 aa9.44□□□□□ -0.9
NUP58-209ENST00000476553 IKZF1Q13422 519 aa9.44□□□□□ -0.9
NUP58-209ENST00000476553 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
NUP58-209ENST00000476553 ISL2Q96A47 359 aa9.44□□□□□ -0.9
NUP58-209ENST00000476553 ARID3AQ99856 593 aa9.44□□□□□ -0.9
NUP58-209ENST00000476553 ZSCAN22P10073 491 aaPredicted RBP9.43□□□□□ -0.9
NUP58-209ENST00000476553 TTLL10Q6ZVT0 673 aa9.43□□□□□ -0.9
NUP58-209ENST00000476553 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
NUP58-209ENST00000476553 IGF2BP3O00425 579 aaKnown RBP eCLIP9.42□□□□□ -0.9
NUP58-209ENST00000476553 GLI1P08151 1106 aa9.42□□□□□ -0.9
NUP58-209ENST00000476553 SYDE1Q6ZW31 735 aaPredicted RBP9.42□□□□□ -0.9
NUP58-209ENST00000476553 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
NUP58-209ENST00000476553 MTMR7Q9Y216 660 aa9.42□□□□□ -0.9
NUP58-209ENST00000476553 PITPNM2Q9BZ72 1349 aa9.41□□□□□ -0.9
NUP58-209ENST00000476553 B8ZZF3 427 aa9.41□□□□□ -0.9
NUP58-209ENST00000476553 AFMP43652 599 aa9.41□□□□□ -0.9
NUP58-209ENST00000476553 ZNF211Q13398 564 aaPredicted RBP9.41□□□□□ -0.9
NUP58-209ENST00000476553 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
NUP58-209ENST00000476553 PRR23BQ6ZRT6 265 aa9.41□□□□□ -0.9
NUP58-209ENST00000476553 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
NUP58-209ENST00000476553 NKPD1Q17RQ9 610 aa9.4□□□□□ -0.9
NUP58-209ENST00000476553 CPNE3O75131 537 aaKnown RBP9.39□□□□□ -0.91
NUP58-209ENST00000476553 NEFLP07196 543 aa9.39□□□□□ -0.91
NUP58-209ENST00000476553 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
NUP58-209ENST00000476553 ZNF157P51786 506 aaPredicted RBP9.39□□□□□ -0.91
NUP58-209ENST00000476553 ORC1Q13415 861 aa9.39□□□□□ -0.91
NUP58-209ENST00000476553 RNF214Q8ND24 703 aa9.39□□□□□ -0.91
NUP58-209ENST00000476553 ANO2Q9NQ90 1003 aa9.39□□□□□ -0.91
NUP58-209ENST00000476553 GTF2IRD1Q9UHL9 959 aa9.39□□□□□ -0.91
NUP58-209ENST00000476553 C1QTNF9P0C862 333 aa9.38□□□□□ -0.91
NUP58-209ENST00000476553 CLCN7P51798 805 aa9.38□□□□□ -0.91
NUP58-209ENST00000476553 ERVK-24P63145 666 aa9.38□□□□□ -0.91
NUP58-209ENST00000476553 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
NUP58-209ENST00000476553 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP58-209ENST00000476553 CCDC97Q96F63 343 aaPredicted RBP9.38□□□□□ -0.91
NUP58-209ENST00000476553 KRTAP17-1Q9BYP8 105 aa9.38□□□□□ -0.91
NUP58-209ENST00000476553 ABL1P00519 1130 aa9.37□□□□□ -0.91
NUP58-209ENST00000476553 BUD31P41223 144 aaPredicted RBP9.37□□□□□ -0.91
NUP58-209ENST00000476553 ECM1Q16610 540 aa9.37□□□□□ -0.91
NUP58-209ENST00000476553 KIRREL1Q96J84 757 aa9.37□□□□□ -0.91
NUP58-209ENST00000476553 C19orf73Q9NVV2 129 aa9.37□□□□□ -0.91
NUP58-209ENST00000476553 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
NUP58-209ENST00000476553 AMIGO3Q86WK7 504 aa9.36□□□□□ -0.91
NUP58-209ENST00000476553 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
NUP58-209ENST00000476553 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
NUP58-209ENST00000476553 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
NUP58-209ENST00000476553 NTF4P34130 210 aa9.35□□□□□ -0.91
NUP58-209ENST00000476553 SSU72Q9NP77 194 aaKnown RBP9.35□□□□□ -0.91
NUP58-209ENST00000476553 PRDM10Q9NQV6 1147 aa9.35□□□□□ -0.91
NUP58-209ENST00000476553 TRAK1Q9UPV9 953 aa9.35□□□□□ -0.91
NUP58-209ENST00000476553 GRM2Q14416 872 aa9.34□□□□□ -0.91
NUP58-209ENST00000476553 CYFIP1Q7L576 1253 aa9.34□□□□□ -0.91
NUP58-209ENST00000476553 FBXO15Q8NCQ5 510 aaPredicted RBP9.34□□□□□ -0.91
NUP58-209ENST00000476553 KCNB2Q92953 911 aa9.34□□□□□ -0.91
NUP58-209ENST00000476553 CCDC74AQ96AQ1 378 aa9.34□□□□□ -0.91
NUP58-209ENST00000476553 EGFL7Q9UHF1 273 aa9.34□□□□□ -0.91
NUP58-209ENST00000476553 BRPF3Q9ULD4 1205 aa9.34□□□□□ -0.91
NUP58-209ENST00000476553 NFIBO00712 420 aa9.33□□□□□ -0.92
NUP58-209ENST00000476553 STK35Q8TDR2 534 aa9.33□□□□□ -0.92
NUP58-209ENST00000476553 CD320Q9NPF0 282 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms