RNA–Protein interactions for RNA: ENST00000476501.3

RN7SL559P-201, Transcript of RNA, 7SL, cytoplasmic 559, pseudogene, humanhuman

BASIC

Gene RN7SL559P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL559P-201ENST00000476501 HMGCRP04035 888 aa14.04□□□□□ -0.16
RN7SL559P-201ENST00000476501 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
RN7SL559P-201ENST00000476501 CDC42EP5Q6NZY7 148 aa14.04□□□□□ -0.16
RN7SL559P-201ENST00000476501 SCYL3Q8IZE3 742 aa14.04□□□□□ -0.16
RN7SL559P-201ENST00000476501 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
RN7SL559P-201ENST00000476501 PTPRAP18433 802 aa14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 NFIAQ12857 509 aa14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 SLC4A10Q6U841 1118 aa14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 AFG3L2Q9Y4W6 797 aa14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 LRRFIP2Q9Y608 721 aaKnown RBP14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 DOCK3Q8IZD9 2030 aa14.03□□□□□ -0.16
RN7SL559P-201ENST00000476501 DOCK2Q92608 1830 aa14.02□□□□□ -0.16
RN7SL559P-201ENST00000476501 TRIM32Q13049 653 aa14.02□□□□□ -0.17
RN7SL559P-201ENST00000476501 LRRC24Q50LG9 513 aa14.02□□□□□ -0.17
RN7SL559P-201ENST00000476501 SUCLG2Q96I99 432 aa14.02□□□□□ -0.17
RN7SL559P-201ENST00000476501 PNMA3Q9UL41 463 aa14.02□□□□□ -0.17
RN7SL559P-201ENST00000476501 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.17
RN7SL559P-201ENST00000476501 PDE8BO95263 885 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 DIXDC1Q155Q3 683 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 FAM110CQ1W6H9 321 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 ZNF697Q5TEC3 545 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 WDR66Q8TBY9 1149 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 GUCD1Q96NT3 240 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 FAM198AQ9UFP1 575 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 AGTPBP1Q9UPW5 1226 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 PTPRFP10586 1907 aa14.01□□□□□ -0.17
RN7SL559P-201ENST00000476501 PHF20L1A8MW92 1017 aa14□□□□□ -0.17
RN7SL559P-201ENST00000476501 ZFPM1Q8IX07 1006 aa14□□□□□ -0.17
RN7SL559P-201ENST00000476501 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 PFASO15067 1338 aa13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 LDHBP07195 334 aaKnown RBP13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 TREML2Q5T2D2 321 aa13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 SRCIN1Q9C0H9 1055 aa13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 OGDHLQ9ULD0 1010 aa13.99□□□□□ -0.17
RN7SL559P-201ENST00000476501 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 CYP2B6P20813 491 aa13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 PRDX5P30044 214 aa13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 RGS3P49796 1198 aa13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 PUM3Q15397 648 aaKnown RBP13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 BICC1Q9H694 974 aaKnown RBP13.98□□□□□ -0.17
RN7SL559P-201ENST00000476501 PHIPQ8WWQ0 1821 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 CTNND1O60716 968 aaKnown RBP13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 VAMP4O75379 141 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 SLC5A1P13866 664 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 GCLCP48506 637 aaPredicted RBP13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 PICALMQ13492 652 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 LRRC26Q2I0M4 334 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 MAFAQ8NHW3 353 aaPredicted RBP13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 TRIB2Q92519 343 aa13.97□□□□□ -0.17
RN7SL559P-201ENST00000476501 FANCIQ9NVI1 1328 aa13.96□□□□□ -0.17
RN7SL559P-201ENST00000476501 NBPF7P0C2Y1 421 aaPredicted RBP13.96□□□□□ -0.17
RN7SL559P-201ENST00000476501 SLURP2P0DP57 97 aa13.96□□□□□ -0.17
RN7SL559P-201ENST00000476501 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.17
RN7SL559P-201ENST00000476501 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
RN7SL559P-201ENST00000476501 KAZALD1Q96I82 304 aa13.96□□□□□ -0.17
RN7SL559P-201ENST00000476501 ENTPD3O75355 529 aa13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 CCDC27Q2M243 656 aa13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 PROCA1Q8NCQ7 364 aaPredicted RBP13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 PRKAG2Q9UGJ0 569 aa13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 GJD2Q9UKL4 321 aa13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 MYH2Q9UKX2 1941 aa13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 ATRNL1Q5VV63 1379 aa13.95□□□□□ -0.18
RN7SL559P-201ENST00000476501 IL16Q14005 1332 aa13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 KIF16BQ96L93 1317 aa13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 DDTLA6NHG4 134 aaPredicted RBP13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 COL9A1P20849 921 aa13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 HMGCS2P54868 508 aa13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 SPP2Q13103 211 aa13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 CCAR1Q8IX12 1150 aaKnown RBP13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 SYMPKQ92797 1274 aaKnown RBP13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 CDX2Q99626 313 aaPredicted RBP13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 NUDT12Q9BQG2 462 aa13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 PRKRIP1Q9H875 184 aaPredicted RBP13.94□□□□□ -0.18
RN7SL559P-201ENST00000476501 PLXNB2O15031 1838 aa13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 ZKSCAN1P17029 563 aaPredicted RBP13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 FGFR2P21802 821 aa13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 SH3BP5LQ7L8J4 393 aa13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 LPIN2Q92539 896 aa13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 IDI2Q9BXS1 227 aa13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 SENP6Q9GZR1 1112 aaPredicted RBP13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
RN7SL559P-201ENST00000476501 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms