RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 RPS8P62241 208 aaKnown RBP19.35■□□□□ 0.69
TVP23B-202ENST00000476139 SYNE3Q6ZMZ3 975 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 KRT23Q9C075 422 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 CNNM2Q9H8M5 875 aa19.35■□□□□ 0.69
TVP23B-202ENST00000476139 GNL3LQ9NVN8 582 aaKnown RBP19.35■□□□□ 0.69
TVP23B-202ENST00000476139 MAGEB6P1A0A0J9YX57 407 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 KINO60870 393 aaKnown RBP19.34■□□□□ 0.69
TVP23B-202ENST00000476139 PIBF1Q8WXW3 757 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 ARHGEF1Q92888 912 aaKnown RBP19.34■□□□□ 0.69
TVP23B-202ENST00000476139 FBXW7Q969H0 707 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 KCNF1Q9H3M0 494 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 POLR3EQ9NVU0 708 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
TVP23B-202ENST00000476139 CYP2D7A0A087X1C5 515 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 SPTLC2O15270 562 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 GUCY1A2P33402 732 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 PPARAQ07869 468 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 C11orf57Q6ZUT1 292 aaPredicted RBP19.34■□□□□ 0.69
TVP23B-202ENST00000476139 BRAPQ7Z569 592 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 FMR1NBQ8N0W7 255 aaPredicted RBP19.34■□□□□ 0.69
TVP23B-202ENST00000476139 FNBP4Q8N3X1 1017 aaPredicted RBP19.34■□□□□ 0.69
TVP23B-202ENST00000476139 SLC26A6Q9BXS9 759 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 DOCK2Q92608 1830 aa19.34■□□□□ 0.69
TVP23B-202ENST00000476139 MARCKSP29966 332 aaPredicted RBP19.33■□□□□ 0.69
TVP23B-202ENST00000476139 RIOK1Q9BRS2 568 aaKnown RBP19.33■□□□□ 0.69
TVP23B-202ENST00000476139 JAG2Q9Y219 1238 aa19.33■□□□□ 0.69
TVP23B-202ENST00000476139 CDKL5O76039 1030 aa19.33■□□□□ 0.68
TVP23B-202ENST00000476139 MRPS27Q92552 414 aaKnown RBP19.33■□□□□ 0.68
TVP23B-202ENST00000476139 MYH15Q9Y2K3 1946 aa19.33■□□□□ 0.68
TVP23B-202ENST00000476139 ANO1Q5XXA6 986 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 CPLX2Q6PUV4 134 aaKnown RBP19.32■□□□□ 0.68
TVP23B-202ENST00000476139 DRC7Q8IY82 874 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 NRBP1Q9UHY1 535 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 PTGS1P23219 599 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
TVP23B-202ENST00000476139 C4AP0C0L4 1744 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 C4BP0C0L5 1744 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 WDHD1O75717 1129 aaPredicted RBP19.32■□□□□ 0.68
TVP23B-202ENST00000476139 EVX2Q03828 476 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 RC3H1Q5TC82 1133 aaKnown RBP19.32■□□□□ 0.68
TVP23B-202ENST00000476139 TXNRD3Q86VQ6 643 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
TVP23B-202ENST00000476139 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
TVP23B-202ENST00000476139 WTAPQ15007 396 aa19.31■□□□□ 0.68
TVP23B-202ENST00000476139 SDF4Q9BRK5 362 aa19.31■□□□□ 0.68
TVP23B-202ENST00000476139 PRDM1O75626 825 aa19.31■□□□□ 0.68
TVP23B-202ENST00000476139 YEATS4O95619 227 aa19.31■□□□□ 0.68
TVP23B-202ENST00000476139 TPTE2Q6XPS3 522 aa19.31■□□□□ 0.68
TVP23B-202ENST00000476139 BCORQ6W2J9 1755 aa19.31■□□□□ 0.68
TVP23B-202ENST00000476139 FBXO33Q7Z6M2 555 aa19.3■□□□□ 0.68
TVP23B-202ENST00000476139 NUP133Q8WUM0 1156 aa19.3■□□□□ 0.68
TVP23B-202ENST00000476139 UBE2Q2Q8WVN8 375 aa19.3■□□□□ 0.68
TVP23B-202ENST00000476139 TRIM5Q9C035 493 aa19.3■□□□□ 0.68
TVP23B-202ENST00000476139 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
TVP23B-202ENST00000476139 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
TVP23B-202ENST00000476139 AXDND1Q5T1B0 1012 aaPredicted RBP19.3■□□□□ 0.68
TVP23B-202ENST00000476139 NYXQ9GZU5 481 aa19.3■□□□□ 0.68
TVP23B-202ENST00000476139 A0A1W2PQ27 194 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 A0A1W2PQ64 194 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 A0A1W2PQD8 194 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 CTAGE5O15320 804 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 TM4SF1P30408 202 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 TERF1P54274 439 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 IQCB1Q15051 598 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 LAMB2P55268 1798 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 LRMPQ12912 555 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 SART3Q15020 963 aaKnown RBP19.29■□□□□ 0.68
TVP23B-202ENST00000476139 TDRD7Q8NHU6 1098 aaKnown RBP19.29■□□□□ 0.68
TVP23B-202ENST00000476139 ERICH2A1L162 156 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 NPHP1O15259 732 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 CHAF1AQ13111 956 aaPredicted RBP19.29■□□□□ 0.68
TVP23B-202ENST00000476139 CCDC186Q7Z3E2 898 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 KCNJ14Q9UNX9 436 aa19.29■□□□□ 0.68
TVP23B-202ENST00000476139 PRDX5P30044 214 aa19.28■□□□□ 0.68
TVP23B-202ENST00000476139 SLC39A14Q15043 492 aa19.28■□□□□ 0.68
TVP23B-202ENST00000476139 FMNL1O95466 1100 aaPredicted RBP19.28■□□□□ 0.68
TVP23B-202ENST00000476139 IFNAR1P17181 557 aa19.28■□□□□ 0.68
TVP23B-202ENST00000476139 HIBADHP31937 336 aaKnown RBP19.28■□□□□ 0.68
TVP23B-202ENST00000476139 MECOMQ03112 1051 aa19.28■□□□□ 0.68
TVP23B-202ENST00000476139 RTN1Q16799 776 aa19.28■□□□□ 0.68
TVP23B-202ENST00000476139 NSUN4Q96CB9 384 aaKnown RBP19.28■□□□□ 0.68
TVP23B-202ENST00000476139 UBAC1Q9BSL1 405 aa19.28■□□□□ 0.68
TVP23B-202ENST00000476139 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
TVP23B-202ENST00000476139 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
TVP23B-202ENST00000476139 BTBD18B2RXH4 712 aa19.27■□□□□ 0.68
TVP23B-202ENST00000476139 U2AF2P26368 475 aaKnown RBP eCLIP19.27■□□□□ 0.68
TVP23B-202ENST00000476139 TRIM29Q14134 588 aa19.27■□□□□ 0.68
TVP23B-202ENST00000476139 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
TVP23B-202ENST00000476139 AATFQ9NY61 560 aaKnown RBP eCLIP19.27■□□□□ 0.68
TVP23B-202ENST00000476139 ZNF202O95125 648 aa19.27■□□□□ 0.68
TVP23B-202ENST00000476139 STX1AQ16623 288 aa19.27■□□□□ 0.68
TVP23B-202ENST00000476139 NBPF11Q86T75 865 aa19.27■□□□□ 0.68
TVP23B-202ENST00000476139 FANCBQ8NB91 859 aa19.27■□□□□ 0.68
TVP23B-202ENST00000476139 TNKSO95271 1327 aa19.27■□□□□ 0.67
TVP23B-202ENST00000476139 ZNF654Q8IZM8 581 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 KIAA1524Q8TCG1 905 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 MAP3K14Q99558 947 aa19.26■□□□□ 0.67
TVP23B-202ENST00000476139 USP17L12C9JPN9 530 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms