RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CCDC189A1A4V9 331 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 TACC1O75410 805 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 ALDH3A1P30838 453 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 RESTQ13127 1097 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 METTL24Q5JXM2 366 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 CPLX4Q7Z7G2 160 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
U2AF1-209ENST00000475639 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
U2AF1-209ENST00000475639 SYNCQ9H7C4 482 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 SUGCTQ9HAC7 445 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 KIF20BQ96Q89 1820 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 CAVIN4Q5BKX8 364 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 KCNB2Q92953 911 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 TUBB4BP68371 445 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 BRD3Q15059 726 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
U2AF1-209ENST00000475639 CCDC114Q96M63 670 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 EMILIN1Q9Y6C2 1016 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 CHL1O00533 1208 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
U2AF1-209ENST00000475639 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
U2AF1-209ENST00000475639 MYL6BP14649 208 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 MAP3K12Q12852 859 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 SETDB1Q15047 1291 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
U2AF1-209ENST00000475639 FTOQ9C0B1 505 aaKnown RBP eCLIP12.94□□□□□ -0.34
U2AF1-209ENST00000475639 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
U2AF1-209ENST00000475639 BIN1O00499 593 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 TUBBP07437 444 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 SETSIPP0DME0 302 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 SNX16P57768 344 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 NECTIN1Q15223 517 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 ENGASEQ8NFI3 743 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 DPCR1Q3MIW9 517 aa12.93□□□□□ -0.34
U2AF1-209ENST00000475639 HNRNPLLQ8WVV9 542 aaKnown RBP12.93□□□□□ -0.34
U2AF1-209ENST00000475639 SH3BP5O60239 455 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 PPFIA4O75335 1185 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 EGFL6Q8IUX8 553 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 PHACTR2O75167 634 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 LACTBP83111 547 aaPredicted RBP12.92□□□□□ -0.34
U2AF1-209ENST00000475639 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 HDXQ7Z353 690 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 GBP7Q8N8V2 638 aaPredicted RBP12.92□□□□□ -0.34
U2AF1-209ENST00000475639 TRIM47Q96LD4 638 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
U2AF1-209ENST00000475639 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 KIFC2Q96AC6 838 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 DHX58Q96C10 678 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 ANKZF1Q9H8Y5 726 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
U2AF1-209ENST00000475639 ZNF213O14771 459 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 JAK2O60674 1132 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
U2AF1-209ENST00000475639 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 GBP6Q6ZN66 633 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
U2AF1-209ENST00000475639 CATIPQ7Z7H3 387 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 ARID4AP29374 1257 aaPredicted RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 TRIM7Q9C029 511 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 PPP2R2CQ9Y2T4 447 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 GOLGA8AA7E2F4 631 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 GOLGA8BA8MQT2 603 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 CASQ2O14958 399 aaPredicted RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 TBCAO75347 108 aaKnown RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 HNRNPH1P31943 449 aaKnown RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 IARSP41252 1262 aaKnown RBP12.91□□□□□ -0.34
U2AF1-209ENST00000475639 CEP120Q8N960 986 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 PNKPQ96T60 521 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 LMBR1Q8WVP7 490 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 BRF1Q92994 677 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 STMN2Q93045 179 aa12.91□□□□□ -0.34
U2AF1-209ENST00000475639 TTC36A6NLP5 189 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 MCM10Q7L590 875 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 WDR70Q9NW82 654 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 FAM204AQ9H8W3 233 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 TACC3Q9Y6A5 838 aa12.9□□□□□ -0.34
U2AF1-209ENST00000475639 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
U2AF1-209ENST00000475639 TOB2Q14106 344 aaPredicted RBP12.9□□□□□ -0.34
U2AF1-209ENST00000475639 NCAPHQ15003 741 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms