RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 RHPN1Q8TCX5 695 aa15.9■□□□□ 0.14
SSPO-205ENST00000475488 VWA3BQ502W6 1294 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 PPFIBP2Q8ND30 876 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 RPS6KA2Q15349 733 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 SND1Q7KZF4 910 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSPO-205ENST00000475488 SKA2Q8WVK7 121 aaPredicted RBP15.89■□□□□ 0.13
SSPO-205ENST00000475488 LZTFL1Q9NQ48 299 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 ABCC5O15440 1437 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 H7C1D1 291 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 SKILP12757 684 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 RXRAP19793 462 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 CNNM4Q6P4Q7 775 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 DACT3Q96B18 629 aaPredicted RBP15.89■□□□□ 0.13
SSPO-205ENST00000475488 MAST3O60307 1309 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 TRIM27P14373 513 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 NOC4LQ9BVI4 516 aaKnown RBP15.89■□□□□ 0.13
SSPO-205ENST00000475488 GGA1Q9UJY5 639 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 CSADQ9Y600 493 aa15.89■□□□□ 0.13
SSPO-205ENST00000475488 NIM1KQ8IY84 436 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 GTF2A1P52655 376 aaPredicted RBP15.88■□□□□ 0.13
SSPO-205ENST00000475488 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
SSPO-205ENST00000475488 FNBP4Q8N3X1 1017 aaPredicted RBP15.88■□□□□ 0.13
SSPO-205ENST00000475488 ATP6V1E1P36543 226 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 ZNF131P52739 623 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 ZSCAN23Q3MJ62 389 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 SUPT20HQ8NEM7 779 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
SSPO-205ENST00000475488 CPXCR1Q8N123 301 aa15.88■□□□□ 0.13
SSPO-205ENST00000475488 IFRD2Q12894 506 aaPredicted RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 ZNF174Q15697 407 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 VPS18Q9P253 973 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 GBP1P32455 592 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 FAM160A1Q05DH4 1040 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 CCDC62Q6P9F0 684 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 TRIM56Q9BRZ2 755 aaKnown RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 RHOXF2BP0C7M4 288 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 RHOXF2Q9BQY4 288 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 PRKAG2Q9UGJ0 569 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 SETD1BQ9UPS6 1966 aaKnown RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 I3L4J1 428 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 TCEANC2Q96MN5 208 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 LUC7L2Q9Y383 392 aaKnown RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 VCXQ9H320 206 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 HMGB1P1B2RPK0 211 aaPredicted RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 GCNT3O95395 438 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 APOBRQ0VD83 1088 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 TCP10Q12799 353 aa15.87■□□□□ 0.13
SSPO-205ENST00000475488 DPP8Q6V1X1 898 aaPredicted RBP15.87■□□□□ 0.13
SSPO-205ENST00000475488 AKAP4Q5JQC9 854 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 CACNA2D3Q8IZS8 1091 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 KIF9Q9HAQ2 790 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 CCDC87Q9NVE4 849 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 TSTA3Q13630 321 aaPredicted RBP15.86■□□□□ 0.13
SSPO-205ENST00000475488 GADL1Q6ZQY3 521 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 IQUBQ8NA54 791 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 CHMP6Q96FZ7 201 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 CCDC94Q9BW85 323 aaPredicted RBP15.86■□□□□ 0.13
SSPO-205ENST00000475488 CDK13Q14004 1512 aaKnown RBP15.86■□□□□ 0.13
SSPO-205ENST00000475488 KRT81Q14533 505 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
SSPO-205ENST00000475488 ACTN4O43707 911 aaKnown RBP15.86■□□□□ 0.13
SSPO-205ENST00000475488 TUBB4BP68371 445 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 NMIQ13287 307 aaPredicted RBP15.86■□□□□ 0.13
SSPO-205ENST00000475488 MYCT1Q8N699 235 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 CSPG5O95196 566 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 DPY19L2Q6NUT2 758 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 PARD3BQ8TEW8 1205 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 HVCN1Q96D96 273 aa15.86■□□□□ 0.13
SSPO-205ENST00000475488 PDE4DQ08499 809 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 ATP2A3Q93084 1043 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
SSPO-205ENST00000475488 CAPN9O14815 690 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 LGSNQ5TDP6 509 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 DNAJC25Q9H1X3 360 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 PLCD1P51178 756 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 ZNF277Q9NRM2 450 aaPredicted RBP15.85■□□□□ 0.13
SSPO-205ENST00000475488 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
SSPO-205ENST00000475488 USP48Q86UV5 1035 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 KRT222Q8N1A0 295 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 PDE6BP35913 854 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 OTUD6AQ7L8S5 288 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 MRPL44Q9H9J2 332 aaKnown RBP15.85■□□□□ 0.13
SSPO-205ENST00000475488 PPP1R2P41236 205 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 YARSP54577 528 aaKnown RBP15.85■□□□□ 0.13
SSPO-205ENST00000475488 RNASE9P60153 205 aaKnown RBP15.85■□□□□ 0.13
SSPO-205ENST00000475488 BSPRYQ5W0U4 402 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 PAGR1Q9BTK6 254 aa15.85■□□□□ 0.13
SSPO-205ENST00000475488 STK25O00506 426 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 CAPN2P17655 700 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 TMX3Q96JJ7 454 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 TMTC4Q5T4D3 741 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 ARHGEF16Q5VV41 709 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 EBAG9O00559 213 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 CLGNO14967 610 aa15.84■□□□□ 0.13
SSPO-205ENST00000475488 CCDC122Q5T0U0 273 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms