RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 OTUD7BQ6GQQ9 843 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 FBXO18Q8NFZ0 1043 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 APBA3O96018 575 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 TMTC2Q8N394 836 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 CCDC88AQ3V6T2 1871 aa17.93■□□□□ 0.46
RPUSD3-215ENST00000475470 PLSCR1O15162 318 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 UFL1O94874 794 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 MYH15Q9Y2K3 1946 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 LDHBP07195 334 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 LIG1P18858 919 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 CCDC173Q0VFZ6 552 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 CTR9Q6PD62 1173 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 RNF214Q8ND24 703 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
RPUSD3-215ENST00000475470 BAZ2AQ9UIF9 1905 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 CYP2D7A0A087X1C5 515 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 IARSP41252 1262 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 PGBD1Q96JS3 809 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 ALG1Q9BT22 464 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 ATP8A2Q9NTI2 1148 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 MAST2Q6P0Q8 1798 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 USP17L12C9JPN9 530 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 USP17L21D6R901 530 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 IGSF3O75054 1194 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 ILDR1Q86SU0 546 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 PHKBQ93100 1093 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 CRAMP1Q96RY5 1269 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 FAM217BQ9NTX9 383 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 RCOR1Q9UKL0 485 aa17.91■□□□□ 0.46
RPUSD3-215ENST00000475470 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 PCP11498 1178 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 USP28Q96RU2 1077 aa17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 NTRK3Q16288 839 aa17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 FTOQ9C0B1 505 aaKnown RBP eCLIP17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 DCP1AQ9NPI6 582 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 GJB4Q9NTQ9 266 aa17.9■□□□□ 0.46
RPUSD3-215ENST00000475470 KLRG2A4D1S0 409 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 RANBP6O60518 1105 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 NUP62CLQ9H1M0 184 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 DACT1Q9NYF0 836 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 GSTO1P78417 241 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 SSRP1Q08945 709 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 RTN1Q16799 776 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 BRAPQ7Z569 592 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 TRIM44Q96DX7 344 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 PPP1R9BQ96SB3 815 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 CD209Q9NNX6 404 aa17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-215ENST00000475470 TNKSO95271 1327 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 POLR3DP05423 398 aaPredicted RBP17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 SLC3A2P08195 630 aaKnown RBP17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 AIFM3Q96NN9 605 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 SLC26A6Q9BXS9 759 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 PODXL2Q9NZ53 605 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 ARPP21Q9UBL0 812 aaPredicted RBP17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 NID2Q14112 1375 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 CCDC196A0A1B0GTZ2 297 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 PRDM1O75626 825 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 TRIM29Q14134 588 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 ZNF654Q8IZM8 581 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 ZSCAN10Q96SZ4 725 aaPredicted RBP17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 DDX19AQ9NUU7 478 aaKnown RBP17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 TAOK2Q9UL54 1235 aa17.88■□□□□ 0.45
RPUSD3-215ENST00000475470 DUOX1Q9NRD9 1551 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 FGRP09769 529 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 IFNAR1P17181 557 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 RCAN1P53805 252 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 SEC23AQ15436 765 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 TMC4Q7Z404 712 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 IQCA1Q86XH1 822 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 NUP133Q8WUM0 1156 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 FMNL1O95466 1100 aaPredicted RBP17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 BAG3O95817 575 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 RXRBP28702 533 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 CAMK4Q16566 473 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 TBC1D16Q8TBP0 767 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 WASF1Q92558 559 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 NOL10Q9BSC4 688 aaKnown RBP17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 TNMDQ9H2S6 317 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 RTEL1Q9NZ71 1219 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 POLLQ9UGP5 575 aa17.87■□□□□ 0.45
RPUSD3-215ENST00000475470 STK36Q9NRP7 1315 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 C6orf229H3BNL8 230 aa17.86■□□□□ 0.45
RPUSD3-215ENST00000475470 PPEF1O14829 653 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms