RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.19
TRAF4-210ENST00000475329 COL4A5P29400 1685 aa16.21■□□□□ 0.18
TRAF4-210ENST00000475329 USP17L12C9JPN9 530 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 USP17L21D6R901 530 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
TRAF4-210ENST00000475329 ANTXR2P58335 489 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 AMOTL1Q8IY63 956 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 TEX11Q8IYF3 940 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 LARGE2Q8N3Y3 721 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 MXD3Q9BW11 206 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
TRAF4-210ENST00000475329 NUCB2P80303 420 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 HHIPL2Q6UWX4 724 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 NECAB1Q8N987 351 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 TGFBRAP1Q8WUH2 860 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 TEKT1Q969V4 418 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 TMEM87BQ96K49 555 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 KCNQ5Q9NR82 932 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 ZNF277Q9NRM2 450 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-210ENST00000475329 TOMM22Q9NS69 142 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
TRAF4-210ENST00000475329 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 CYP2D7A0A087X1C5 515 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 YDJCA8MPS7 323 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 RHBDL3P58872 404 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 HDLBPQ00341 1268 aaKnown RBP16.18■□□□□ 0.18
TRAF4-210ENST00000475329 ST3GAL1Q11201 340 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 RRP12Q5JTH9 1297 aaKnown RBP16.18■□□□□ 0.18
TRAF4-210ENST00000475329 GTF3C6Q969F1 213 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 MKRN1Q9UHC7 482 aaKnown RBP16.18■□□□□ 0.18
TRAF4-210ENST00000475329 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 MYO3BQ8WXR4 1341 aa16.18■□□□□ 0.18
TRAF4-210ENST00000475329 DICER1Q9UPY3 1922 aaKnown RBP16.17■□□□□ 0.18
TRAF4-210ENST00000475329 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-210ENST00000475329 PFKFB2O60825 505 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 KDM4AO75164 1064 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
TRAF4-210ENST00000475329 SCNN1DP51172 638 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 EVCP57679 992 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 STK3Q13188 491 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 RAB3GAP1Q15042 981 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 ESR2Q92731 530 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-210ENST00000475329 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
TRAF4-210ENST00000475329 ANGEL1Q9UNK9 670 aaKnown RBP16.17■□□□□ 0.18
TRAF4-210ENST00000475329 ORC4O43929 436 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 FGRP09769 529 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 USP17L8P0C7I0 530 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 CYP2D6P10635 497 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 CRKP46108 304 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
TRAF4-210ENST00000475329 C12orf60Q5U649 245 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 KIAA0825Q8IV33 1275 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 MRIQ9BWK5 157 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 INCENPQ9NQS7 918 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
TRAF4-210ENST00000475329 BCS1LQ9Y276 419 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRAF4-210ENST00000475329 FLT1P17948 1338 aa16.16■□□□□ 0.18
TRAF4-210ENST00000475329 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 POLR3DP05423 398 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-210ENST00000475329 PDE4BQ07343 736 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 TMEM67Q5HYA8 995 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-210ENST00000475329 ZSWIM5Q9P217 1185 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 LTBP3Q9NS15 1303 aa16.15■□□□□ 0.18
TRAF4-210ENST00000475329 ERICH2A1L162 156 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 NFKBIEO00221 500 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 IFIT3O14879 490 aaKnown RBP16.14■□□□□ 0.17
TRAF4-210ENST00000475329 GJB2P29033 226 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 PDIA3P30101 505 aaKnown RBP16.14■□□□□ 0.17
TRAF4-210ENST00000475329 LIFRP42702 1097 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 NT5C2P49902 561 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 RSBN1LQ6PCB5 846 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-210ENST00000475329 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 USP40Q9NVE5 1235 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 SAP30BPQ9UHR5 308 aaKnown RBP16.14■□□□□ 0.17
TRAF4-210ENST00000475329 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 ZNRF3Q9ULT6 936 aa16.14■□□□□ 0.17
TRAF4-210ENST00000475329 MYH6P13533 1939 aa16.13■□□□□ 0.17
TRAF4-210ENST00000475329 RANBP6O60518 1105 aaKnown RBP16.13■□□□□ 0.17
TRAF4-210ENST00000475329 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
TRAF4-210ENST00000475329 SCRN1Q12765 414 aa16.13■□□□□ 0.17
TRAF4-210ENST00000475329 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
TRAF4-210ENST00000475329 APOBEC3HQ6NTF7 200 aaKnown RBP16.13■□□□□ 0.17
TRAF4-210ENST00000475329 CDC42EP5Q6NZY7 148 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms