RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 ZFPM1Q8IX07 1006 aa19.9■□□□□ 0.78
ITGB1-211ENST00000475184 SCYL3Q8IZE3 742 aa19.9■□□□□ 0.78
ITGB1-211ENST00000475184 PXYLP1Q8TE99 480 aa19.9■□□□□ 0.78
ITGB1-211ENST00000475184 PICK1Q9NRD5 415 aa19.9■□□□□ 0.78
ITGB1-211ENST00000475184 USP40Q9NVE5 1235 aa19.9■□□□□ 0.78
ITGB1-211ENST00000475184 PHF20L1A8MW92 1017 aa19.89■□□□□ 0.77
ITGB1-211ENST00000475184 EYA2O00167 538 aa19.89■□□□□ 0.77
ITGB1-211ENST00000475184 SOX1O00570 391 aaPredicted RBP19.89■□□□□ 0.77
ITGB1-211ENST00000475184 TFRCP02786 760 aaKnown RBP19.89■□□□□ 0.77
ITGB1-211ENST00000475184 LDHBP07195 334 aaKnown RBP19.89■□□□□ 0.77
ITGB1-211ENST00000475184 CAPN2P17655 700 aa19.89■□□□□ 0.77
ITGB1-211ENST00000475184 GADL1Q6ZQY3 521 aa19.89■□□□□ 0.77
ITGB1-211ENST00000475184 DEFB118Q96PH6 123 aa19.89■□□□□ 0.77
ITGB1-211ENST00000475184 SLC45A1Q9Y2W3 748 aa19.89■□□□□ 0.77
ITGB1-211ENST00000475184 TNPO2O14787 897 aaKnown RBP19.88■□□□□ 0.77
ITGB1-211ENST00000475184 PTPRAP18433 802 aa19.88■□□□□ 0.77
ITGB1-211ENST00000475184 IRF5Q13568 498 aa19.88■□□□□ 0.77
ITGB1-211ENST00000475184 SMCR8Q8TEV9 937 aaPredicted RBP19.88■□□□□ 0.77
ITGB1-211ENST00000475184 PAK6Q9NQU5 681 aaPredicted RBP19.88■□□□□ 0.77
ITGB1-211ENST00000475184 AFG3L2Q9Y4W6 797 aa19.88■□□□□ 0.77
ITGB1-211ENST00000475184 ATAD5Q96QE3 1844 aa19.88■□□□□ 0.77
ITGB1-211ENST00000475184 RFX5P48382 616 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-211ENST00000475184 RGS3P49796 1198 aa19.87■□□□□ 0.77
ITGB1-211ENST00000475184 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
ITGB1-211ENST00000475184 RFX7Q2KHR2 1363 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 LOC285556D6RIA3 1793 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 PTPRCP08575 1304 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 SALL1Q9NSC2 1324 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 LRCH3Q96II8 777 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 CRISPLD2Q9H0B8 497 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 GNL3LQ9NVN8 582 aaKnown RBP19.86■□□□□ 0.77
ITGB1-211ENST00000475184 STAP2Q9UGK3 403 aa19.86■□□□□ 0.77
ITGB1-211ENST00000475184 ENTPD3O75355 529 aa19.85■□□□□ 0.77
ITGB1-211ENST00000475184 ATP2B3Q16720 1220 aa19.85■□□□□ 0.77
ITGB1-211ENST00000475184 ATG9AQ7Z3C6 839 aa19.85■□□□□ 0.77
ITGB1-211ENST00000475184 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
ITGB1-211ENST00000475184 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
ITGB1-211ENST00000475184 PAWRQ96IZ0 340 aaKnown RBP19.85■□□□□ 0.77
ITGB1-211ENST00000475184 IDI2Q9BXS1 227 aa19.85■□□□□ 0.77
ITGB1-211ENST00000475184 TAOK2Q9UL54 1235 aa19.85■□□□□ 0.77
ITGB1-211ENST00000475184 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
ITGB1-211ENST00000475184 SH3BP5LQ7L8J4 393 aa19.84■□□□□ 0.77
ITGB1-211ENST00000475184 COA7Q96BR5 231 aa19.84■□□□□ 0.77
ITGB1-211ENST00000475184 UNC80Q8N2C7 3258 aa19.84■□□□□ 0.77
ITGB1-211ENST00000475184 DDX60LQ5H9U9 1706 aaKnown RBP19.84■□□□□ 0.77
ITGB1-211ENST00000475184 GAKO14976 1311 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 TRIM75PA6NK02 468 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 SEMA3EO15041 775 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 MAP3K10Q02779 954 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 NECAB2Q7Z6G3 386 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 ANKRD13CQ8N6S4 541 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 DENND2AQ9ULE3 1009 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 AGTPBP1Q9UPW5 1226 aa19.83■□□□□ 0.77
ITGB1-211ENST00000475184 CTNND1O60716 968 aaKnown RBP19.82■□□□□ 0.76
ITGB1-211ENST00000475184 DIS3LQ8TF46 1054 aaKnown RBP19.82■□□□□ 0.76
ITGB1-211ENST00000475184 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.82■□□□□ 0.761e-13■■■■□ 20.9
ITGB1-211ENST00000475184 SIL1Q9H173 461 aa19.82■□□□□ 0.76
ITGB1-211ENST00000475184 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-211ENST00000475184 LAMA2P24043 3122 aaKnown RBP19.82■□□□□ 0.76
ITGB1-211ENST00000475184 PLXNB2O15031 1838 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 DDTLA6NHG4 134 aaPredicted RBP19.81■□□□□ 0.76
ITGB1-211ENST00000475184 SLURP2P0DP57 97 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 PHKA1P46020 1223 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 FAM110CQ1W6H9 321 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 ZGPATQ8N5A5 531 aaKnown RBP19.81■□□□□ 0.76
ITGB1-211ENST00000475184 CEP126Q9P2H0 1117 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 FBXO3Q9UK99 471 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 PNMA3Q9UL41 463 aa19.81■□□□□ 0.76
ITGB1-211ENST00000475184 CIAO1O76071 339 aa19.8■□□□□ 0.76
ITGB1-211ENST00000475184 TREML2Q5T2D2 321 aa19.8■□□□□ 0.76
ITGB1-211ENST00000475184 CCDC84Q86UT8 332 aaPredicted RBP19.8■□□□□ 0.76
ITGB1-211ENST00000475184 DZIP1Q86YF9 867 aaKnown RBP19.8■□□□□ 0.76
ITGB1-211ENST00000475184 ANKLE1Q8NAG6 615 aa19.8■□□□□ 0.76
ITGB1-211ENST00000475184 GDF15Q99988 308 aa19.8■□□□□ 0.76
ITGB1-211ENST00000475184 DDX4Q9NQI0 724 aaKnown RBP19.8■□□□□ 0.76
ITGB1-211ENST00000475184 DNAH12Q6ZR08 3092 aa19.79■□□□□ 0.76
ITGB1-211ENST00000475184 BMP8BP34820 402 aa19.79■□□□□ 0.76
ITGB1-211ENST00000475184 PICALMQ13492 652 aa19.79■□□□□ 0.76
ITGB1-211ENST00000475184 C7orf61Q8IZ16 206 aa19.79■□□□□ 0.76
ITGB1-211ENST00000475184 HMGCRP04035 888 aa19.78■□□□□ 0.76
ITGB1-211ENST00000475184 GPR153Q6NV75 609 aa19.78■□□□□ 0.76
ITGB1-211ENST00000475184 SLF2Q8IX21 1173 aa19.78■□□□□ 0.76
ITGB1-211ENST00000475184 SSH1Q8WYL5 1049 aa19.78■□□□□ 0.76
ITGB1-211ENST00000475184 ZMYND8Q9ULU4 1186 aaPredicted RBP19.78■□□□□ 0.76
ITGB1-211ENST00000475184 ZBTB22O15209 634 aa19.77■□□□□ 0.76
ITGB1-211ENST00000475184 BTDP43251 543 aa19.77■□□□□ 0.76
ITGB1-211ENST00000475184 MNX1P50219 401 aaPredicted RBP19.77■□□□□ 0.76
ITGB1-211ENST00000475184 CCDC102BQ68D86 513 aa19.77■□□□□ 0.76
ITGB1-211ENST00000475184 PROCA1Q8NCQ7 364 aaPredicted RBP19.77■□□□□ 0.76
ITGB1-211ENST00000475184 FAM163AQ96GL9 167 aaPredicted RBP19.77■□□□□ 0.76
ITGB1-211ENST00000475184 ABCF2Q9UG63 623 aa19.77■□□□□ 0.76
ITGB1-211ENST00000475184 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
ITGB1-211ENST00000475184 ADORA1P30542 326 aa19.76■□□□□ 0.75
ITGB1-211ENST00000475184 GCLCP48506 637 aaPredicted RBP19.76■□□□□ 0.75
ITGB1-211ENST00000475184 RASGRF1Q13972 1273 aa19.76■□□□□ 0.75
ITGB1-211ENST00000475184 DEFB123Q8N688 67 aa19.76■□□□□ 0.75
ITGB1-211ENST00000475184 NBPF3Q9H094 633 aa19.76■□□□□ 0.75
ITGB1-211ENST00000475184 MROH7-TTC4A0A0A0MT08 1334 aa19.76■□□□□ 0.75
ITGB1-211ENST00000475184 PDS5AQ29RF7 1337 aaKnown RBP19.76■□□□□ 0.75
ITGB1-211ENST00000475184 RPTORQ8N122 1335 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms