RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 ZFPM1Q8IX07 1006 aa18.55■□□□□ 0.56
PCCB-212ENST00000474833 EYSQ5T1H1 3165 aa18.54■□□□□ 0.56
PCCB-212ENST00000474833 IRF5Q13568 498 aa18.54■□□□□ 0.56
PCCB-212ENST00000474833 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
PCCB-212ENST00000474833 DEFB118Q96PH6 123 aa18.54■□□□□ 0.56
PCCB-212ENST00000474833 PUM3Q15397 648 aaKnown RBP18.53■□□□□ 0.56
PCCB-212ENST00000474833 DIS3LQ8TF46 1054 aaKnown RBP18.53■□□□□ 0.56
PCCB-212ENST00000474833 GDF15Q99988 308 aa18.53■□□□□ 0.56
PCCB-212ENST00000474833 DOCK1Q14185 1865 aa18.52■□□□□ 0.56
PCCB-212ENST00000474833 PRDX5P30044 214 aa18.52■□□□□ 0.56
PCCB-212ENST00000474833 SLC45A1Q9Y2W3 748 aa18.52■□□□□ 0.56
PCCB-212ENST00000474833 AFG3L2Q9Y4W6 797 aa18.52■□□□□ 0.56
PCCB-212ENST00000474833 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 SLURP2P0DP57 97 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 PTPRAP18433 802 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 MNX1P50219 401 aaPredicted RBP18.51■□□□□ 0.55
PCCB-212ENST00000474833 SH3BP5LQ7L8J4 393 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 PAWRQ96IZ0 340 aaKnown RBP18.51■□□□□ 0.55
PCCB-212ENST00000474833 ZHX2Q9Y6X8 837 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 DNAH12Q6ZR08 3092 aa18.51■□□□□ 0.55
PCCB-212ENST00000474833 DOCK3Q8IZD9 2030 aa18.5■□□□□ 0.55
PCCB-212ENST00000474833 TNPO2O14787 897 aaKnown RBP18.5■□□□□ 0.55
PCCB-212ENST00000474833 TFRCP02786 760 aaKnown RBP18.5■□□□□ 0.55
PCCB-212ENST00000474833 BMP8BP34820 402 aa18.5■□□□□ 0.55
PCCB-212ENST00000474833 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
PCCB-212ENST00000474833 CAPN2P17655 700 aa18.49■□□□□ 0.55
PCCB-212ENST00000474833 RFX5P48382 616 aaPredicted RBP18.49■□□□□ 0.55
PCCB-212ENST00000474833 MAP3K10Q02779 954 aa18.49■□□□□ 0.55
PCCB-212ENST00000474833 GPR153Q6NV75 609 aa18.49■□□□□ 0.55
PCCB-212ENST00000474833 FASTKD5Q7L8L6 764 aaKnown RBP18.49■□□□□ 0.55
PCCB-212ENST00000474833 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.49■□□□□ 0.55
PCCB-212ENST00000474833 LOC285556D6RIA3 1793 aa18.48■□□□□ 0.55
PCCB-212ENST00000474833 Q7L0L9 218 aa18.48■□□□□ 0.55
PCCB-212ENST00000474833 USP40Q9NVE5 1235 aa18.48■□□□□ 0.55
PCCB-212ENST00000474833 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
PCCB-212ENST00000474833 DDX60LQ5H9U9 1706 aaKnown RBP18.48■□□□□ 0.55
PCCB-212ENST00000474833 RGS3P49796 1198 aa18.47■□□□□ 0.55
PCCB-212ENST00000474833 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
PCCB-212ENST00000474833 ATG9AQ7Z3C6 839 aa18.47■□□□□ 0.55
PCCB-212ENST00000474833 IDI2Q9BXS1 227 aa18.47■□□□□ 0.55
PCCB-212ENST00000474833 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCCB-212ENST00000474833 ZNF521Q96K83 1311 aa18.47■□□□□ 0.55
PCCB-212ENST00000474833 SALL1Q9NSC2 1324 aa18.47■□□□□ 0.55
PCCB-212ENST00000474833 EYA2O00167 538 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 NECAB2Q7Z6G3 386 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 CCDC84Q86UT8 332 aaPredicted RBP18.46■□□□□ 0.55
PCCB-212ENST00000474833 C7orf61Q8IZ16 206 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 DEFB123Q8N688 67 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 LPIN2Q92539 896 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 PICK1Q9NRD5 415 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 PLXNB2O15031 1838 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 GAKO14976 1311 aa18.46■□□□□ 0.55
PCCB-212ENST00000474833 TRIM75PA6NK02 468 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 ENTPD3O75355 529 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 SLC5A1P13866 664 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 LRIT3Q3SXY7 679 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 ANKRD13CQ8N6S4 541 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 ANKLE1Q8NAG6 615 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
PCCB-212ENST00000474833 USP44Q9H0E7 712 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 ZMYND8Q9ULU4 1186 aaPredicted RBP18.45■□□□□ 0.54
PCCB-212ENST00000474833 AGTPBP1Q9UPW5 1226 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 MYH2Q9UKX2 1941 aa18.45■□□□□ 0.54
PCCB-212ENST00000474833 PRUNE2Q8WUY3 3088 aa18.44■□□□□ 0.54
PCCB-212ENST00000474833 DDTLA6NHG4 134 aaPredicted RBP18.44■□□□□ 0.54
PCCB-212ENST00000474833 LDHBP07195 334 aaKnown RBP18.44■□□□□ 0.54
PCCB-212ENST00000474833 TRIM32Q13049 653 aa18.44■□□□□ 0.54
PCCB-212ENST00000474833 FAM110CQ1W6H9 321 aa18.44■□□□□ 0.54
PCCB-212ENST00000474833 DDX4Q9NQI0 724 aaKnown RBP18.44■□□□□ 0.54
PCCB-212ENST00000474833 STXBP5LQ9Y2K9 1186 aa18.44■□□□□ 0.54
PCCB-212ENST00000474833 CDH23Q9H251 3354 aa18.44■□□□□ 0.54
PCCB-212ENST00000474833 MTMR10Q9NXD2 777 aa18.43■□□□□ 0.54
PCCB-212ENST00000474833 GJD2Q9UKL4 321 aa18.43■□□□□ 0.54
PCCB-212ENST00000474833 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
PCCB-212ENST00000474833 ZBTB22O15209 634 aa18.42■□□□□ 0.54
PCCB-212ENST00000474833 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
PCCB-212ENST00000474833 HMGCRP04035 888 aa18.42■□□□□ 0.54
PCCB-212ENST00000474833 MAGEA10P43363 369 aaPredicted RBP18.42■□□□□ 0.54
PCCB-212ENST00000474833 PHKA1P46020 1223 aa18.42■□□□□ 0.54
PCCB-212ENST00000474833 COA7Q96BR5 231 aa18.42■□□□□ 0.54
PCCB-212ENST00000474833 SYN1P17600 705 aa18.41■□□□□ 0.54
PCCB-212ENST00000474833 MRPL50Q8N5N7 158 aaKnown RBP18.41■□□□□ 0.54
PCCB-212ENST00000474833 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
PCCB-212ENST00000474833 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
PCCB-212ENST00000474833 PFASO15067 1338 aa18.41■□□□□ 0.54
PCCB-212ENST00000474833 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
PCCB-212ENST00000474833 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
PCCB-212ENST00000474833 TDHQ8IZJ6 230 aa18.4■□□□□ 0.54
PCCB-212ENST00000474833 ATAD5Q96QE3 1844 aa18.39■□□□□ 0.54
PCCB-212ENST00000474833 FAM196BA6NMK8 535 aa18.39■□□□□ 0.53
PCCB-212ENST00000474833 SEMA3EO15041 775 aa18.39■□□□□ 0.53
PCCB-212ENST00000474833 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
PCCB-212ENST00000474833 PROCA1Q8NCQ7 364 aaPredicted RBP18.39■□□□□ 0.53
PCCB-212ENST00000474833 ZNF384Q8TF68 577 aa18.39■□□□□ 0.53
PCCB-212ENST00000474833 TRIB2Q92519 343 aa18.39■□□□□ 0.53
PCCB-212ENST00000474833 OGDHLQ9ULD0 1010 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms