RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 DDIT3P35638 169 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 CUL4AQ13619 759 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 ADCK5Q3MIX3 580 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 CCDC93Q567U6 631 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 NAA16Q6N069 864 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-207ENST00000474825 RUFY3Q7L099 469 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 CERS3Q8IU89 383 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 AIDAQ96BJ3 306 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 MFRPQ9BY79 579 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 IRX2Q9BZI1 471 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-207ENST00000474825 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-207ENST00000474825 RAI14Q9P0K7 980 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 PIM2Q9P1W9 311 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 ABCF2Q9UG63 623 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 ANAPC4Q9UJX5 808 aa7.89□□□□□ -1.15
ATG4A-207ENST00000474825 MYH7P12883 1935 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 GPR75-ASB3A0A0A6YYF3 556 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 FRAT2O75474 233 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-207ENST00000474825 MBD4O95243 580 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
ATG4A-207ENST00000474825 LDHCP07864 332 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 HMGB1P09429 215 aaKnown RBP7.88□□□□□ -1.15
ATG4A-207ENST00000474825 FGRP09769 529 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 NEK4P51957 841 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 GSTO1P78417 241 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 EXOSC10Q01780 885 aaKnown RBP7.88□□□□□ -1.15
ATG4A-207ENST00000474825 GRIK5Q16478 980 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 STRIP1Q5VSL9 837 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 STOX1Q6ZVD7 989 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 HSCBQ8IWL3 235 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 LCORLQ8N3X6 602 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 ARMT1Q9H993 441 aa7.88□□□□□ -1.15
ATG4A-207ENST00000474825 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
ATG4A-207ENST00000474825 WDR19Q8NEZ3 1342 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 MAGEB6P1A0A0J9YX57 407 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 E7EWF7 191 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 C21orf2O43822 256 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 RPS6KB1P23443 525 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 PSEN2P49810 448 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 NT5C2P49902 561 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 EVCP57679 992 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 HDLBPQ00341 1268 aaKnown RBP7.87□□□□□ -1.15
ATG4A-207ENST00000474825 CHAF1AQ13111 956 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-207ENST00000474825 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-207ENST00000474825 IMMTQ16891 758 aaKnown RBP7.87□□□□□ -1.15
ATG4A-207ENST00000474825 SBK1Q52WX2 424 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 DACT2Q5SW24 774 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 TTLL5Q6EMB2 1281 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 CERS5Q8N5B7 392 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 ZNF784Q8NCA9 323 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-207ENST00000474825 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 JAKMIP1Q96N16 626 aaKnown RBP7.87□□□□□ -1.15
ATG4A-207ENST00000474825 NEK1Q96PY6 1258 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 ATP8A2Q9NTI2 1148 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 TAOK2Q9UL54 1235 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 CYP46A1Q9Y6A2 500 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 MAST2Q6P0Q8 1798 aa7.87□□□□□ -1.15
ATG4A-207ENST00000474825 MROH7-TTC4A0A0A0MT08 1334 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 MYO5AQ9Y4I1 1855 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 ZNF213O14771 459 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 PRKAB2O43741 272 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 PCP11498 1178 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 CASTP20810 708 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 SLC4A3P48751 1232 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 RHBDL3P58872 404 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 GTF2IP78347 998 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 ANKRD1Q15327 319 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 DALRD3Q5D0E6 543 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 MFSD14BQ5SR56 506 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 BLOC1S2Q6QNY1 142 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 DHX32Q7L7V1 743 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 DZIP1Q86YF9 867 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 MB21D2Q8IYB1 491 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 MIGA1Q8NAN2 632 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 NLGN2Q8NFZ4 835 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 INTS4Q96HW7 963 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 TMX3Q96JJ7 454 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 MTA3Q9BTC8 594 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
ATG4A-207ENST00000474825 NACAP1Q9BZK3 213 aa7.86□□□□□ -1.15
ATG4A-207ENST00000474825 USP17L3A6NCW0 530 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 USP17L4A6NCW7 530 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 YDJCA8MPS7 323 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 ECE2O60344 883 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 BAG3O95817 575 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 VIL1P09327 827 aaKnown RBP7.85□□□□□ -1.15
ATG4A-207ENST00000474825 AK2P54819 239 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 DYNLL1P63167 89 aaKnown RBP7.85□□□□□ -1.15
ATG4A-207ENST00000474825 TOB2Q14106 344 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-207ENST00000474825 USP17L1Q7RTZ2 530 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 STAG1Q8WVM7 1258 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 ZSCAN31Q96LW9 406 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-207ENST00000474825 GMLQ99445 158 aa7.85□□□□□ -1.15
ATG4A-207ENST00000474825 CRNKL1Q9BZJ0 848 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms