RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 OTUD5Q96G74 571 aa20.34■□□□□ 0.85
PFDN4-203ENST00000474326 AATFQ9NY61 560 aaKnown RBP eCLIP20.34■□□□□ 0.85
PFDN4-203ENST00000474326 ZBTB47Q9UFB7 747 aaPredicted RBP20.34■□□□□ 0.85
PFDN4-203ENST00000474326 DOCK2Q92608 1830 aa20.34■□□□□ 0.85
PFDN4-203ENST00000474326 NPM3O75607 178 aaKnown RBP20.33■□□□□ 0.85
PFDN4-203ENST00000474326 GTF2A2P52657 109 aa20.33■□□□□ 0.85
PFDN4-203ENST00000474326 ERO1BQ86YB8 467 aa20.33■□□□□ 0.85
PFDN4-203ENST00000474326 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.33■□□□□ 0.85
PFDN4-203ENST00000474326 GPATCH3Q96I76 525 aa20.33■□□□□ 0.85
PFDN4-203ENST00000474326 DNAJC2Q99543 621 aaKnown RBP20.33■□□□□ 0.85
PFDN4-203ENST00000474326 PIH1D3Q9NQM4 214 aaKnown RBP20.33■□□□□ 0.85
PFDN4-203ENST00000474326 RFX7Q2KHR2 1363 aa20.33■□□□□ 0.84
PFDN4-203ENST00000474326 CYP7A1P22680 504 aa20.32■□□□□ 0.84
PFDN4-203ENST00000474326 RHBDL3P58872 404 aa20.32■□□□□ 0.84
PFDN4-203ENST00000474326 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
PFDN4-203ENST00000474326 ZKSCAN4Q969J2 545 aaPredicted RBP20.32■□□□□ 0.84
PFDN4-203ENST00000474326 SPDYE5A6NIY4 337 aa20.31■□□□□ 0.84
PFDN4-203ENST00000474326 IFNL1Q8IU54 200 aa20.31■□□□□ 0.84
PFDN4-203ENST00000474326 MAGEB6Q8N7X4 407 aa20.31■□□□□ 0.84
PFDN4-203ENST00000474326 TRIM34Q9BYJ4 488 aa20.31■□□□□ 0.84
PFDN4-203ENST00000474326 PICK1Q9NRD5 415 aa20.31■□□□□ 0.84
PFDN4-203ENST00000474326 SNCAIPQ9Y6H5 919 aa20.31■□□□□ 0.84
PFDN4-203ENST00000474326 TBC1D8O95759 1140 aa20.3■□□□□ 0.84
PFDN4-203ENST00000474326 PPATQ06203 517 aa20.3■□□□□ 0.84
PFDN4-203ENST00000474326 ZFPM1Q8IX07 1006 aa20.3■□□□□ 0.84
PFDN4-203ENST00000474326 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
PFDN4-203ENST00000474326 OSBPL5Q9H0X9 879 aaPredicted RBP20.3■□□□□ 0.84
PFDN4-203ENST00000474326 DDX4Q9NQI0 724 aaKnown RBP20.3■□□□□ 0.84
PFDN4-203ENST00000474326 NDUFB9Q9Y6M9 179 aa20.3■□□□□ 0.84
PFDN4-203ENST00000474326 CCL15-CCL14A0A0B4J2E2 113 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 GOLIM4O00461 696 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 CETPP11597 493 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 PPP4CP60510 307 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 PPIL2Q13356 520 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 SNAPC2Q13487 334 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 CCL15Q16663 113 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.29■□□□□ 0.84
PFDN4-203ENST00000474326 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
PFDN4-203ENST00000474326 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 ATRNL1Q5VV63 1379 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 COL2A1P02458 1487 aaPredicted RBP20.29■□□□□ 0.84
PFDN4-203ENST00000474326 LAMB1P07942 1786 aa20.29■□□□□ 0.84
PFDN4-203ENST00000474326 DDTLA6NHG4 134 aaPredicted RBP20.28■□□□□ 0.84
PFDN4-203ENST00000474326 INPP5BP32019 993 aa20.28■□□□□ 0.84
PFDN4-203ENST00000474326 GJA5P36382 358 aa20.28■□□□□ 0.84
PFDN4-203ENST00000474326 AAMPQ13685 434 aa20.28■□□□□ 0.84
PFDN4-203ENST00000474326 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
PFDN4-203ENST00000474326 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.28■□□□□ 0.84
PFDN4-203ENST00000474326 ZNF112Q9UJU3 913 aa20.28■□□□□ 0.84
PFDN4-203ENST00000474326 ATP5JP18859 108 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 USP5P45974 858 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 NOL9Q5SY16 702 aaKnown RBP20.27■□□□□ 0.84
PFDN4-203ENST00000474326 SLC9C2Q5TAH2 1124 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 TGFBRAP1Q8WUH2 860 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 CFHR5Q9BXR6 569 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 BOLA2Q9H3K6 86 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 PAG1Q9NWQ8 432 aa20.27■□□□□ 0.84
PFDN4-203ENST00000474326 TESPA1A2RU30 521 aaPredicted RBP20.26■□□□□ 0.83
PFDN4-203ENST00000474326 SMARCA5O60264 1052 aaPredicted RBP20.26■□□□□ 0.83
PFDN4-203ENST00000474326 HLA-DOAP06340 250 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 DGKZQ13574 1117 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 NOM1Q5C9Z4 860 aaKnown RBP20.26■□□□□ 0.83
PFDN4-203ENST00000474326 SH3BP5LQ7L8J4 393 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 ADGRA1Q86SQ6 560 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 SCYL3Q8IZE3 742 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
PFDN4-203ENST00000474326 MIGA1Q8NAN2 632 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 PI4KBQ9UBF8 816 aa20.26■□□□□ 0.83
PFDN4-203ENST00000474326 HERC5Q9UII4 1024 aaKnown RBP20.26■□□□□ 0.83
PFDN4-203ENST00000474326 MYO5AQ9Y4I1 1855 aaKnown RBP20.25■□□□□ 0.83
PFDN4-203ENST00000474326 GPR25O00155 361 aa20.25■□□□□ 0.83
PFDN4-203ENST00000474326 IGF2BP3O00425 579 aaKnown RBP eCLIP20.25■□□□□ 0.83
PFDN4-203ENST00000474326 TBC1D12O60347 775 aa20.25■□□□□ 0.83
PFDN4-203ENST00000474326 CTNND1O60716 968 aaKnown RBP20.25■□□□□ 0.83
PFDN4-203ENST00000474326 CAPN15O75808 1086 aa20.25■□□□□ 0.83
PFDN4-203ENST00000474326 ZSCAN25Q6NSZ9 544 aa20.25■□□□□ 0.83
PFDN4-203ENST00000474326 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
PFDN4-203ENST00000474326 FLT1P17948 1338 aa20.25■□□□□ 0.83
PFDN4-203ENST00000474326 MAGEB6P1A0A0J9YX57 407 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 IRF6O14896 467 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 FKTNO75072 461 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 HAUS7Q99871 368 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 PCDHB15Q9Y5E8 787 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 CASP8AP2Q9UKL3 1982 aa20.24■□□□□ 0.83
PFDN4-203ENST00000474326 PDE6AP16499 860 aa20.23■□□□□ 0.83
PFDN4-203ENST00000474326 DYNLL1P63167 89 aaKnown RBP20.23■□□□□ 0.83
PFDN4-203ENST00000474326 MAP3K10Q02779 954 aa20.23■□□□□ 0.83
PFDN4-203ENST00000474326 TAF1CQ15572 869 aaPredicted RBP20.23■□□□□ 0.83
PFDN4-203ENST00000474326 CTU1Q7Z7A3 348 aaKnown RBP20.23■□□□□ 0.83
PFDN4-203ENST00000474326 ZNF296Q8WUU4 475 aaPredicted RBP20.23■□□□□ 0.83
PFDN4-203ENST00000474326 BRI3BPQ8WY22 251 aa20.23■□□□□ 0.83
PFDN4-203ENST00000474326 ZFYVE28Q9HCC9 887 aa20.23■□□□□ 0.83
PFDN4-203ENST00000474326 PHF20L1A8MW92 1017 aa20.22■□□□□ 0.83
PFDN4-203ENST00000474326 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
PFDN4-203ENST00000474326 ZCCHC17Q9NP64 241 aaKnown RBP20.22■□□□□ 0.83
PFDN4-203ENST00000474326 ZNF532Q9HCE3 1301 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms