RNA–Protein interactions for RNA: ENST00000474172.1

SETX-204, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-204ENST00000474172 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
SETX-204ENST00000474172 EYA3Q99504 573 aa11.91□□□□□ -0.5
SETX-204ENST00000474172 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
SETX-204ENST00000474172 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
SETX-204ENST00000474172 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
SETX-204ENST00000474172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
SETX-204ENST00000474172 MYH1P12882 1939 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 PFKFB2O60825 505 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 KDM4AO75164 1064 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 PLCD1P51178 756 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 EVCP57679 992 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 TGFB2P61812 414 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 CCDC93Q567U6 631 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 ANP32EQ9BTT0 268 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 DDX4Q9NQI0 724 aaKnown RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.5
SETX-204ENST00000474172 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
SETX-204ENST00000474172 NFKBIEO00221 500 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 BRD1O95696 1058 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 HMGB1P09429 215 aaKnown RBP11.89□□□□□ -0.51
SETX-204ENST00000474172 FGRP09769 529 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 POLD1P28340 1107 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 GJB2P29033 226 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 MCM5P33992 734 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 GSTO1P78417 241 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 APOBEC3HQ6NTF7 200 aaKnown RBP11.89□□□□□ -0.51
SETX-204ENST00000474172 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 KIAA0825Q8IV33 1275 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 ZFPM1Q8IX07 1006 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 FBXL16Q8N461 479 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 SLC44A5Q8NCS7 719 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 TBC1D22AQ8WUA7 517 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 GTF3C6Q969F1 213 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 NACAP1Q9BZK3 213 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 SH2B1Q9NRF2 756 aaPredicted RBP11.89□□□□□ -0.51
SETX-204ENST00000474172 PIM2Q9P1W9 311 aa11.89□□□□□ -0.51
SETX-204ENST00000474172 KLF18A0A0U1RQI7 1052 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 SHTN1A0MZ66 631 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 G3V3G9 751 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 LDHCP07864 332 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 RXRAP19793 462 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 ANKRD1Q15327 319 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 C12orf60Q5U649 245 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 GIMAP6Q6P9H5 292 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 MFSD6Q6ZSS7 791 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
SETX-204ENST00000474172 PSMD1Q99460 953 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
SETX-204ENST00000474172 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 FAM217BQ9NTX9 383 aaPredicted RBP11.88□□□□□ -0.51
SETX-204ENST00000474172 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
SETX-204ENST00000474172 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 PSMD14O00487 310 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 NMT2O60551 498 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
SETX-204ENST00000474172 RAD17O75943 681 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
SETX-204ENST00000474172 SYT1P21579 422 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 MCM4P33991 863 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 USP5P45974 858 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 CRKP46108 304 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 CACNB3P54284 484 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 RASSF7Q02833 373 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 NFIAQ12857 509 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 SEC23AQ15436 765 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 FAM47AQ5JRC9 791 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 STRIP1Q5VSL9 837 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
SETX-204ENST00000474172 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 IL27Q8NEV9 243 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 GMLQ99445 158 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
SETX-204ENST00000474172 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
SETX-204ENST00000474172 FLT1P17948 1338 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 TCHHQ07283 1943 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
SETX-204ENST00000474172 CDC27P30260 824 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 FOSBP53539 338 aa11.86□□□□□ -0.51
SETX-204ENST00000474172 DALRD3Q5D0E6 543 aaKnown RBP11.86□□□□□ -0.51
SETX-204ENST00000474172 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms