RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 DEFB118Q96PH6 123 aa25.21■■□□□ 1.63
APP-215ENST00000474136 ATRNL1Q5VV63 1379 aa25.21■■□□□ 1.63
APP-215ENST00000474136 ZNF521Q96K83 1311 aa25.2■■□□□ 1.63
APP-215ENST00000474136 EYA2O00167 538 aa25.2■■□□□ 1.62
APP-215ENST00000474136 TFRCP02786 760 aaKnown RBP25.2■■□□□ 1.62
APP-215ENST00000474136 RFX5P48382 616 aaPredicted RBP25.2■■□□□ 1.62
APP-215ENST00000474136 SCYL3Q8IZE3 742 aa25.2■■□□□ 1.62
APP-215ENST00000474136 LPIN2Q92539 896 aa25.2■■□□□ 1.62
APP-215ENST00000474136 STAP2Q9UGK3 403 aa25.2■■□□□ 1.62
APP-215ENST00000474136 COL6A3P12111 3177 aa25.19■■□□□ 1.62
APP-215ENST00000474136 AK9Q5TCS8 1911 aa25.19■■□□□ 1.62
APP-215ENST00000474136 PTPRAP18433 802 aa25.19■■□□□ 1.62
APP-215ENST00000474136 FASTKD5Q7L8L6 764 aaKnown RBP25.19■■□□□ 1.62
APP-215ENST00000474136 USP44Q9H0E7 712 aa25.19■■□□□ 1.62
APP-215ENST00000474136 AFG3L2Q9Y4W6 797 aa25.19■■□□□ 1.62
APP-215ENST00000474136 LDHBP07195 334 aaKnown RBP25.18■■□□□ 1.62
APP-215ENST00000474136 MRPL50Q8N5N7 158 aaKnown RBP25.18■■□□□ 1.62
APP-215ENST00000474136 PICK1Q9NRD5 415 aa25.18■■□□□ 1.62
APP-215ENST00000474136 TNPO2O14787 897 aaKnown RBP25.17■■□□□ 1.62
APP-215ENST00000474136 RGS3P49796 1198 aa25.17■■□□□ 1.62
APP-215ENST00000474136 SH3BP5LQ7L8J4 393 aa25.17■■□□□ 1.62
APP-215ENST00000474136 ATG9AQ7Z3C6 839 aa25.17■■□□□ 1.62
APP-215ENST00000474136 PXYLP1Q8TE99 480 aa25.17■■□□□ 1.62
APP-215ENST00000474136 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.17■■□□□ 1.62
APP-215ENST00000474136 TAOK2Q9UL54 1235 aa25.17■■□□□ 1.62
APP-215ENST00000474136 MGAMO43451 1857 aa25.17■■□□□ 1.62
APP-215ENST00000474136 A0A1W2PPC1 479 aa25.16■■□□□ 1.62
APP-215ENST00000474136 CCDC84Q86UT8 332 aaPredicted RBP25.16■■□□□ 1.62
APP-215ENST00000474136 IRF5Q13568 498 aa25.15■■□□□ 1.62
APP-215ENST00000474136 DIS3LQ8TF46 1054 aaKnown RBP25.15■■□□□ 1.62
APP-215ENST00000474136 PAWRQ96IZ0 340 aaKnown RBP25.15■■□□□ 1.62
APP-215ENST00000474136 PAK6Q9NQU5 681 aaPredicted RBP25.15■■□□□ 1.62
APP-215ENST00000474136 A0A0C4DFX4 3053 aa25.15■■□□□ 1.62
APP-215ENST00000474136 ZSCAN29Q8IWY8 852 aaPredicted RBP25.14■■□□□ 1.62
APP-215ENST00000474136 SMCR8Q8TEV9 937 aaPredicted RBP25.14■■□□□ 1.62
APP-215ENST00000474136 CRISPLD2Q9H0B8 497 aa25.14■■□□□ 1.62
APP-215ENST00000474136 SLC45A1Q9Y2W3 748 aa25.14■■□□□ 1.62
APP-215ENST00000474136 DDTLA6NHG4 134 aaPredicted RBP25.13■■□□□ 1.61
APP-215ENST00000474136 TRIM75PA6NK02 468 aa25.13■■□□□ 1.61
APP-215ENST00000474136 E9PSI1 815 aa25.13■■□□□ 1.61
APP-215ENST00000474136 ENTPD3O75355 529 aa25.13■■□□□ 1.61
APP-215ENST00000474136 PHKA1P46020 1223 aa25.13■■□□□ 1.61
APP-215ENST00000474136 ATP2B3Q16720 1220 aa25.13■■□□□ 1.61
APP-215ENST00000474136 ANKRD13CQ8N6S4 541 aa25.13■■□□□ 1.61
APP-215ENST00000474136 IDI2Q9BXS1 227 aa25.13■■□□□ 1.61
APP-215ENST00000474136 SIL1Q9H173 461 aa25.13■■□□□ 1.61
APP-215ENST00000474136 LRRFIP2Q9Y608 721 aaKnown RBP25.13■■□□□ 1.61
APP-215ENST00000474136 DDX4Q9NQI0 724 aaKnown RBP25.12■■□□□ 1.61
APP-215ENST00000474136 SALL1Q9NSC2 1324 aa25.12■■□□□ 1.61
APP-215ENST00000474136 MYH13Q9UKX3 1938 aa25.12■■□□□ 1.61
APP-215ENST00000474136 MAP3K10Q02779 954 aa25.12■■□□□ 1.61
APP-215ENST00000474136 GNL3LQ9NVN8 582 aaKnown RBP25.12■■□□□ 1.61
APP-215ENST00000474136 RFX7Q2KHR2 1363 aa25.11■■□□□ 1.61
APP-215ENST00000474136 TREML2Q5T2D2 321 aa25.11■■□□□ 1.61
APP-215ENST00000474136 COA7Q96BR5 231 aa25.11■■□□□ 1.61
APP-215ENST00000474136 DENND2AQ9ULE3 1009 aa25.11■■□□□ 1.61
APP-215ENST00000474136 AGTPBP1Q9UPW5 1226 aa25.11■■□□□ 1.61
APP-215ENST00000474136 GAKO14976 1311 aa25.1■■□□□ 1.61
APP-215ENST00000474136 PTPRCP08575 1304 aa25.1■■□□□ 1.61
APP-215ENST00000474136 CTNND1O60716 968 aaKnown RBP25.1■■□□□ 1.61
APP-215ENST00000474136 PICALMQ13492 652 aa25.1■■□□□ 1.61
APP-215ENST00000474136 NECAB2Q7Z6G3 386 aa25.1■■□□□ 1.61
APP-215ENST00000474136 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.1■■□□□ 1.61
APP-215ENST00000474136 CEP126Q9P2H0 1117 aa25.1■■□□□ 1.61
APP-215ENST00000474136 ZMYND8Q9ULU4 1186 aaPredicted RBP25.1■■□□□ 1.61
APP-215ENST00000474136 ADORA1P30542 326 aa25.09■■□□□ 1.61
APP-215ENST00000474136 SLFN5Q08AF3 891 aa25.09■■□□□ 1.61
APP-215ENST00000474136 C7orf61Q8IZ16 206 aa25.09■■□□□ 1.61
APP-215ENST00000474136 GDF15Q99988 308 aa25.09■■□□□ 1.61
APP-215ENST00000474136 DOCK2Q92608 1830 aa25.08■■□□□ 1.61
APP-215ENST00000474136 CAPN2P17655 700 aa25.08■■□□□ 1.6
APP-215ENST00000474136 SSH1Q8WYL5 1049 aa25.08■■□□□ 1.6
APP-215ENST00000474136 DOCK3Q8IZD9 2030 aa25.07■■□□□ 1.6
APP-215ENST00000474136 FAM196BA6NMK8 535 aa25.07■■□□□ 1.6
APP-215ENST00000474136 SEMA3EO15041 775 aa25.07■■□□□ 1.6
APP-215ENST00000474136 TRIM32Q13049 653 aa25.07■■□□□ 1.6
APP-215ENST00000474136 FAM110CQ1W6H9 321 aa25.07■■□□□ 1.6
APP-215ENST00000474136 ALPK3Q96L96 1907 aa25.07■■□□□ 1.6
APP-215ENST00000474136 PTPRFP10586 1907 aa25.06■■□□□ 1.6
APP-215ENST00000474136 CIAO1O76071 339 aa25.06■■□□□ 1.6
APP-215ENST00000474136 BTDP43251 543 aa25.06■■□□□ 1.6
APP-215ENST00000474136 DZIP1Q86YF9 867 aaKnown RBP25.06■■□□□ 1.6
APP-215ENST00000474136 ABCF2Q9UG63 623 aa25.06■■□□□ 1.6
APP-215ENST00000474136 CCDC102BQ68D86 513 aa25.05■■□□□ 1.6
APP-215ENST00000474136 TRMT2AQ8IZ69 625 aaKnown RBP25.05■■□□□ 1.6
APP-215ENST00000474136 PA2G4Q9UQ80 394 aaKnown RBP25.05■■□□□ 1.6
APP-215ENST00000474136 PHIPQ8WWQ0 1821 aa25.04■■□□□ 1.6
APP-215ENST00000474136 SYN1P17600 705 aa25.04■■□□□ 1.6
APP-215ENST00000474136 BMP8BP34820 402 aa25.04■■□□□ 1.6
APP-215ENST00000474136 RASGRF1Q13972 1273 aa25.04■■□□□ 1.6
APP-215ENST00000474136 Q7L0L9 218 aa25.04■■□□□ 1.6
APP-215ENST00000474136 ZGPATQ8N5A5 531 aaKnown RBP25.04■■□□□ 1.6
APP-215ENST00000474136 FBXO3Q9UK99 471 aa25.04■■□□□ 1.6
APP-215ENST00000474136 PNMA3Q9UL41 463 aa25.04■■□□□ 1.6
APP-215ENST00000474136 DOCK1Q14185 1865 aa25.04■■□□□ 1.6
APP-215ENST00000474136 HMGCRP04035 888 aa25.03■■□□□ 1.6
APP-215ENST00000474136 MNX1P50219 401 aaPredicted RBP25.03■■□□□ 1.6
APP-215ENST00000474136 SPP2Q13103 211 aa25.03■■□□□ 1.6
APP-215ENST00000474136 DEFB123Q8N688 67 aa25.03■■□□□ 1.6
APP-215ENST00000474136 FAM163AQ96GL9 167 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms