RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-214ENST00000473778 BMP6P22004 513 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 SYKP43405 635 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 GRIN1Q05586 938 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 TRDNQ13061 729 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 KCND1Q9NSA2 647 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
C9orf3-214ENST00000473778 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 DOCK2Q92608 1830 aa12.66□□□□□ -0.38
C9orf3-214ENST00000473778 FANCGO15287 622 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 STARD3NLO95772 234 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 FGFR2P21802 821 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 EVA1CP58658 441 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 LONRF3Q496Y0 759 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 PPP1R13BQ96KQ4 1090 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 LRP5O75197 1615 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 ARAP2Q8WZ64 1704 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 PRKAB2O43741 272 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 GSDMDP57764 484 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 FANCCQ00597 558 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 GOLGA8FQ08AF8 430 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 GOLGA8DPQ0D2H9 430 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
C9orf3-214ENST00000473778 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 IMPACTQ9P2X3 320 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 COL4A1P02462 1669 aa12.65□□□□□ -0.38
C9orf3-214ENST00000473778 ZBTB43O43298 467 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 PPP6R2O75170 966 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 TOB1P50616 345 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-214ENST00000473778 PDE4BQ07343 736 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 RESP18Q5W5W9 173 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
C9orf3-214ENST00000473778 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 MBD4O95243 580 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-214ENST00000473778 KMT5BQ4FZB7 885 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 STK11IPQ8N1F8 1099 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 MAGEB6Q8N7X4 407 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 AIDAQ96BJ3 306 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 ARMT1Q9H993 441 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 INTS13Q9NVM9 706 aa12.64□□□□□ -0.39
C9orf3-214ENST00000473778 BCL9O00512 1426 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 FAM237AA0A1B0GTK4 181 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 GOLGA8AA7E2F4 631 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 IGSF3O75054 1194 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
C9orf3-214ENST00000473778 ZRSR1Q15695 479 aaKnown RBP12.63□□□□□ -0.39
C9orf3-214ENST00000473778 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 SLC26A6Q9BXS9 759 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-214ENST00000473778 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 IKBKBO14920 756 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 PDE8AO60658 829 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 ELF2Q15723 593 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 HSP90AA4PQ58FG1 418 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 NFXL1Q6ZNB6 911 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 TMEM87BQ96K49 555 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
C9orf3-214ENST00000473778 KCNJ14Q9UNX9 436 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 PCDHA5Q9Y5H7 936 aa12.63□□□□□ -0.39
C9orf3-214ENST00000473778 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 BCORQ6W2J9 1755 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 SFPQP23246 707 aaKnown RBP eCLIP12.62□□□□□ -0.39
C9orf3-214ENST00000473778 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-214ENST00000473778 PUM3Q15397 648 aaKnown RBP12.62□□□□□ -0.39
C9orf3-214ENST00000473778 FBXO38Q6PIJ6 1188 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
C9orf3-214ENST00000473778 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 LCORLQ8N3X6 602 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 LPIN2Q92539 896 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 FANCLQ9NW38 375 aa12.62□□□□□ -0.39
C9orf3-214ENST00000473778 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
C9orf3-214ENST00000473778 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 CDKL5O76039 1030 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 LIFRP42702 1097 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 NR5A1Q13285 461 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 ALX1Q15699 326 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 KRBA2Q6ZNG9 492 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 ZNF34Q8IZ26 560 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 CCDC150Q8NCX0 1101 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 NAPBQ9H115 298 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms