RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TNS2Q63HR2 1409 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 MAP3K1Q13233 1512 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 BRWD3Q6RI45 1802 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 FAM83GA6ND36 823 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 PTPRAP18433 802 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 EPHA1P21709 976 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 CFPP27918 469 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 SEC13P55735 322 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 CABP4P57796 275 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 NLRP12P59046 1061 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ATP11AP98196 1134 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ADAMTSL4Q6UY14 1074 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ZAR1Q86SH2 424 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 NLRP13Q86W25 1043 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 STK11IPQ8N1F8 1099 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 AFAP1Q8N556 730 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 JMYQ8N9B5 988 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 WNT8BQ93098 351 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ADAM19Q9H013 955 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 LRRC4CQ9HCJ2 640 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 OSGEPQ9NPF4 335 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ZC3H7BQ9UGR2 993 aaKnown RBP3.7□□□□□ -1.82
CALD1-216ENST00000473714 IVNS1ABPQ9Y6Y0 642 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 MLH3Q9UHC1 1453 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ABCC3O15438 1527 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 ATP7AQ04656 1500 aa3.7□□□□□ -1.82
CALD1-216ENST00000473714 MSH6P52701 1360 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 CARNS1A5YM72 827 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 E9PSI1 815 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 KCNQ2O43526 872 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 IGFBP4P22692 258 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 ADMP35318 185 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 SCNN1AP37088 669 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 ARL4DP49703 201 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 CYP27A1Q02318 531 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 MESP2Q0VG99 397 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 CRTC2Q53ET0 693 aaPredicted RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 LARP1Q6PKG0 1096 aaKnown RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 LRRC56Q8IYG6 542 aaPredicted RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 FAM9AQ8IZU1 332 aaPredicted RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 OR13H1Q8NG92 308 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 FBLIM1Q8WUP2 373 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 BCL7CQ8WUZ0 217 aaPredicted RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 VTI1AQ96AJ9 217 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 RC3H2Q9HBD1 1191 aaKnown RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 CYP4F12Q9HCS2 524 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 MAFBQ9Y5Q3 323 aaPredicted RBP3.69□□□□□ -1.82
CALD1-216ENST00000473714 FAM135AQ9P2D6 1515 aa3.69□□□□□ -1.82
CALD1-216ENST00000473714 GOLGA3Q08378 1498 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 SPHKAPQ2M3C7 1700 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 PLEKHD1A6NEE1 506 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 LRRC10BA6NIK2 292 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 FAM170BA6NMN3 283 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 H3BRJ5 948 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 ATG7O95352 703 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 ZSCAN22P10073 491 aaPredicted RBP3.68□□□□□ -1.82
CALD1-216ENST00000473714 DPYDQ12882 1025 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 EFCAB2Q5VUJ9 269 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 LCNL1Q6ZST4 164 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 TTLL10Q6ZVT0 673 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 TREML1Q86YW5 311 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 RGS22Q8NE09 1264 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 GLIS3Q8NEA6 775 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 YIPF2Q9BWQ6 316 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 RASSF4Q9H2L5 321 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.68□□□□□ -1.82
CALD1-216ENST00000473714 FAM53CQ9NYF3 392 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 RAPGEFL1Q9UHV5 662 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 KCNMB2Q9Y691 235 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 SETD5Q9C0A6 1442 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 UGGT1Q9NYU2 1555 aa3.68□□□□□ -1.82
CALD1-216ENST00000473714 SHANK3Q9BYB0 1731 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 TNRQ92752 1358 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 KIDINS220Q9ULH0 1771 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 KCNA6P17658 529 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 TTC39BQ5VTQ0 682 aaPredicted RBP3.67□□□□□ -1.82
CALD1-216ENST00000473714 ZNF574Q6ZN55 896 aaPredicted RBP3.67□□□□□ -1.82
CALD1-216ENST00000473714 SPRED2Q7Z698 418 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 CILP2Q8IUL8 1156 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 SMG8Q8ND04 991 aaKnown RBP3.67□□□□□ -1.82
CALD1-216ENST00000473714 FAM200AQ8TCP9 573 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 SLC7A3Q8WY07 619 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 LRRC59Q96AG4 307 aaKnown RBP3.67□□□□□ -1.82
CALD1-216ENST00000473714 MYO19Q96H55 970 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 PPP1R16BQ96T49 567 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 PBX4Q9BYU1 374 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 LMCD1Q9NZU5 365 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 PRKAG2Q9UGJ0 569 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 LRFN2Q9ULH4 789 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 NOVA2Q9UNW9 492 aaKnown RBP3.67□□□□□ -1.82
CALD1-216ENST00000473714 JAG2Q9Y219 1238 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 NLRP1Q9C000 1473 aa3.67□□□□□ -1.82
CALD1-216ENST00000473714 PRDM15P57071 1507 aaPredicted RBP3.66□□□□□ -1.82
CALD1-216ENST00000473714 CTTNBP2Q8WZ74 1663 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 PTK7Q13308 1070 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 TRIP4Q15650 581 aaPredicted RBP3.66□□□□□ -1.82
CALD1-216ENST00000473714 FAM26DQ5JW98 314 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 CDPF1Q6NVV7 123 aa3.66□□□□□ -1.82
CALD1-216ENST00000473714 POP1Q99575 1024 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms