RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 NIM1KQ8IY84 436 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
LMNA-213ENST00000473598 CRNKL1Q9BZJ0 848 aaKnown RBP17.47■□□□□ 0.39
LMNA-213ENST00000473598 TDO2P48775 406 aa17.46■□□□□ 0.39
LMNA-213ENST00000473598 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
LMNA-213ENST00000473598 GAKO14976 1311 aa17.46■□□□□ 0.38
LMNA-213ENST00000473598 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 GPR75-ASB3A0A0A6YYF3 556 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 FZD9O00144 591 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 COL9A3Q14050 684 aaPredicted RBP17.45■□□□□ 0.38
LMNA-213ENST00000473598 GIMAP6Q6P9H5 292 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
LMNA-213ENST00000473598 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
LMNA-213ENST00000473598 LAMB1P07942 1786 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 F8W031 263 aaPredicted RBP17.45■□□□□ 0.38
LMNA-213ENST00000473598 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
LMNA-213ENST00000473598 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 TRAK2O60296 914 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 RAD17O75943 681 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
LMNA-213ENST00000473598 BTDP43251 543 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 ATP8A2Q9NTI2 1148 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 ZNRF3Q9ULT6 936 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 ECM29Q5VYK3 1845 aa17.44■□□□□ 0.38
LMNA-213ENST00000473598 AK2P54819 239 aa17.43■□□□□ 0.38
LMNA-213ENST00000473598 DDNO94850 711 aaPredicted RBP17.43■□□□□ 0.38
LMNA-213ENST00000473598 CXCL9Q07325 125 aa17.43■□□□□ 0.38
LMNA-213ENST00000473598 ZSCAN30Q86W11 494 aa17.43■□□□□ 0.38
LMNA-213ENST00000473598 SH3RF3Q8TEJ3 882 aaPredicted RBP17.43■□□□□ 0.38
LMNA-213ENST00000473598 ALDH8A1Q9H2A2 487 aaPredicted RBP17.43■□□□□ 0.38
LMNA-213ENST00000473598 DCP1AQ9NPI6 582 aaPredicted RBP17.43■□□□□ 0.38
LMNA-213ENST00000473598 DAGLAQ9Y4D2 1042 aa17.43■□□□□ 0.38
LMNA-213ENST00000473598 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 PLCG2P16885 1265 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
LMNA-213ENST00000473598 KIAA0825Q8IV33 1275 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 NCOA7Q8NI08 942 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
LMNA-213ENST00000473598 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
LMNA-213ENST00000473598 MYH1P12882 1939 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 SCNN1DP51172 638 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 PPARAQ07869 468 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 CCDC173Q0VFZ6 552 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 TCEANC2Q96MN5 208 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
LMNA-213ENST00000473598 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
LMNA-213ENST00000473598 GLTPD2A6NH11 291 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 KIF20AO95235 890 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 USP5P45974 858 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 EIF6P56537 245 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 RHBDL3P58872 404 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 EXOSC10Q01780 885 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 CTDSPL2Q05D32 466 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 CTR9Q6PD62 1173 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 NOL8Q76FK4 1167 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 TMX3Q96JJ7 454 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 MKRN1Q9UHC7 482 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 ANAPC4Q9UJX5 808 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 MYO3BQ8WXR4 1341 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 PSMD14O00487 310 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 DYNC1I1O14576 645 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 VIL1P09327 827 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 CRKP46108 304 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 ANKRD1Q15327 319 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
LMNA-213ENST00000473598 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 LIMCH1Q9UPQ0 1083 aa17.4■□□□□ 0.38
LMNA-213ENST00000473598 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 USP17L12C9JPN9 530 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 USP17L21D6R901 530 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 TRDNQ13061 729 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 AKNAD1Q5T1N1 836 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
LMNA-213ENST00000473598 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
LMNA-213ENST00000473598 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 STAG1Q8WVM7 1258 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 TNPO1Q92973 898 aaKnown RBP17.39■□□□□ 0.37
LMNA-213ENST00000473598 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
LMNA-213ENST00000473598 FAM13BQ9NYF5 915 aa17.39■□□□□ 0.37
LMNA-213ENST00000473598 ARPP21Q9UBL0 812 aaPredicted RBP17.39■□□□□ 0.37
LMNA-213ENST00000473598 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
LMNA-213ENST00000473598 TOB2Q14106 344 aaPredicted RBP17.38■□□□□ 0.37
LMNA-213ENST00000473598 SBK1Q52WX2 424 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 CIAPIN1Q6FI81 312 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 GTPBP4Q9BZE4 634 aaKnown RBP17.38■□□□□ 0.37
LMNA-213ENST00000473598 MFSD6Q6ZSS7 791 aa17.38■□□□□ 0.37
LMNA-213ENST00000473598 Q6ZUG5 572 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms