RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
NHLRC3-204ENST00000473371 TOGARAM2Q6ZUX3 1019 aa16.33■□□□□ 0.2
NHLRC3-204ENST00000473371 KRI1Q8N9T8 703 aaKnown RBP16.33■□□□□ 0.2
NHLRC3-204ENST00000473371 GOLGA8AA7E2F4 631 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 B4E1Z4 1266 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 HNRNPH2P55795 449 aaKnown RBP16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 SPECC1LQ69YQ0 1117 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 NKX2-3Q8TAU0 364 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 NFE2L3Q9Y4A8 694 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 TBC1D8O95759 1140 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 OAS2P29728 719 aaKnown RBP16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 CHRNA2Q15822 529 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 MAN1B1Q9UKM7 699 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 SASH3O75995 380 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 IRX5P78411 483 aaPredicted RBP16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 TC2NQ8N9U0 490 aa16.32■□□□□ 0.2
NHLRC3-204ENST00000473371 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 MYL10Q9BUA6 226 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 ARFGAP3Q9NP61 516 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 POSTNQ15063 836 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 DESI2Q9BSY9 194 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
NHLRC3-204ENST00000473371 RANBP6O60518 1105 aaKnown RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 NEK11Q8NG66 645 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 ADD2P35612 726 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 MDM2Q00987 491 aaPredicted RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 RSRC2Q7L4I2 434 aaKnown RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 GOLGA1Q92805 767 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 SMARCE1Q969G3 411 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 NUP188Q5SRE5 1749 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 GLI3P10071 1580 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 NTRK3Q16288 839 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 TXLNBQ8N3L3 684 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 RABGGTAQ92696 567 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 DHX58Q96C10 678 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 ABCC12Q96J65 1359 aa16.3■□□□□ 0.2
NHLRC3-204ENST00000473371 UBE2Q2LH0YL09 131 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 MCAMP43121 646 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 IFIT5Q13325 482 aaKnown RBP16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 KIFC2Q96AC6 838 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 UBXN6Q9BZV1 441 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 IDH1O75874 414 aaKnown RBP16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 GPS2Q13227 327 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 ENOX1Q8TC92 643 aaKnown RBP16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 TRERF1Q96PN7 1200 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 RAI14Q9P0K7 980 aa16.29■□□□□ 0.2
NHLRC3-204ENST00000473371 ZNF18P17022 549 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 ST5P78524 1137 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 ELOA2Q8IYF1 753 aaPredicted RBP16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 MYH7P12883 1935 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 FAM89AQ96GI7 184 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 FAM217BQ9NTX9 383 aaPredicted RBP16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 BTBD18B2RXH4 712 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 GRIN1Q05586 938 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 LY9Q9HBG7 655 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 SAMSN1Q9NSI8 373 aaKnown RBP16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
NHLRC3-204ENST00000473371 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.2
NHLRC3-204ENST00000473371 ZSWIM4Q9H7M6 989 aa16.27■□□□□ 0.2
NHLRC3-204ENST00000473371 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 CCDC175P0C221 793 aa16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 TCIRG1Q13488 830 aa16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 MORC3Q14149 939 aa16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 DIS3L2Q8IYB7 885 aaKnown RBP16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 WASF1Q92558 559 aa16.27■□□□□ 0.19
NHLRC3-204ENST00000473371 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms