RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PICALMQ13492 652 aa24.02■■□□□ 1.44
SF1-213ENST00000472725 CST9Q5W186 159 aa24.02■■□□□ 1.44
SF1-213ENST00000472725 LCORLQ8N3X6 602 aa24.02■■□□□ 1.44
SF1-213ENST00000472725 ATP8A2Q9NTI2 1148 aa24.02■■□□□ 1.44
SF1-213ENST00000472725 FLT1P17948 1338 aa24.02■■□□□ 1.44
SF1-213ENST00000472725 PAPPA2Q9BXP8 1791 aa24.01■■□□□ 1.43
SF1-213ENST00000472725 PPP1R12BO60237 982 aaPredicted RBP24.01■■□□□ 1.43
SF1-213ENST00000472725 HSPA6P17066 643 aa24.01■■□□□ 1.43
SF1-213ENST00000472725 SLFNL1Q499Z3 407 aa24.01■■□□□ 1.43
SF1-213ENST00000472725 C2orf69Q8N8R5 385 aa24.01■■□□□ 1.43
SF1-213ENST00000472725 STRBPQ96SI9 672 aaKnown RBP24.01■■□□□ 1.43
SF1-213ENST00000472725 ARMT1Q9H993 441 aa24.01■■□□□ 1.43
SF1-213ENST00000472725 CREBZFQ9NS37 354 aa24.01■■□□□ 1.43
SF1-213ENST00000472725 UNCXA6NJT0 531 aa24■■□□□ 1.43
SF1-213ENST00000472725 CHGBP05060 677 aa24■■□□□ 1.43
SF1-213ENST00000472725 NBPF12Q5TAG4 269 aaPredicted RBP24■■□□□ 1.43
SF1-213ENST00000472725 DCAF15Q66K64 600 aa24■■□□□ 1.43
SF1-213ENST00000472725 GIMAP6Q6P9H5 292 aa24■■□□□ 1.43
SF1-213ENST00000472725 DDRGK1Q96HY6 314 aa24■■□□□ 1.43
SF1-213ENST00000472725 GBA2Q9HCG7 927 aaPredicted RBP24■■□□□ 1.43
SF1-213ENST00000472725 DIAPH3Q9NSV4 1193 aa24■■□□□ 1.43
SF1-213ENST00000472725 TAOK2Q9UL54 1235 aa24■■□□□ 1.43
SF1-213ENST00000472725 GPAA1O43292 621 aa23.99■■□□□ 1.43
SF1-213ENST00000472725 MFAP1P55081 439 aaKnown RBP23.99■■□□□ 1.43
SF1-213ENST00000472725 FMR1Q06787 632 aaKnown RBP eCLIP23.99■■□□□ 1.43
SF1-213ENST00000472725 MAP3K11Q16584 847 aa23.99■■□□□ 1.43
SF1-213ENST00000472725 MCMDC2Q4G0Z9 681 aa23.99■■□□□ 1.43
SF1-213ENST00000472725 PRAMEF18Q5VWM3 479 aa23.99■■□□□ 1.43
SF1-213ENST00000472725 ZNF408Q9H9D4 720 aa23.99■■□□□ 1.43
SF1-213ENST00000472725 MKRN1Q9UHC7 482 aaKnown RBP23.99■■□□□ 1.43
SF1-213ENST00000472725 MYH1P12882 1939 aa23.99■■□□□ 1.43
SF1-213ENST00000472725 DLK2Q6UY11 383 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 ARMC9Q7Z3E5 817 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 MAPKAPK5Q8IW41 473 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 ZSCAN29Q8IWY8 852 aaPredicted RBP23.98■■□□□ 1.43
SF1-213ENST00000472725 ZFPM1Q8IX07 1006 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 HHIPL1Q96JK4 782 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 CSRNP1Q96S65 589 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 SLC4A4Q9Y6R1 1079 aa23.98■■□□□ 1.43
SF1-213ENST00000472725 M0R2C6 588 aa23.97■■□□□ 1.43
SF1-213ENST00000472725 TBC1D12O60347 775 aa23.97■■□□□ 1.43
SF1-213ENST00000472725 MAP3K10Q02779 954 aa23.97■■□□□ 1.43
SF1-213ENST00000472725 NAV1Q8NEY1 1877 aa23.97■■□□□ 1.43
SF1-213ENST00000472725 DCP1AQ9NPI6 582 aaPredicted RBP23.97■■□□□ 1.43
SF1-213ENST00000472725 PI4KBQ9UBF8 816 aa23.97■■□□□ 1.43
SF1-213ENST00000472725 DDX60LQ5H9U9 1706 aaKnown RBP23.96■■□□□ 1.43
SF1-213ENST00000472725 SSC5DA1L4H1 1573 aa23.96■■□□□ 1.43
SF1-213ENST00000472725 DDTLA6NHG4 134 aaPredicted RBP23.96■■□□□ 1.43
SF1-213ENST00000472725 HLA-DOAP06340 250 aa23.96■■□□□ 1.43
SF1-213ENST00000472725 NMIQ13287 307 aaPredicted RBP23.96■■□□□ 1.43
SF1-213ENST00000472725 SH3BP5LQ7L8J4 393 aa23.96■■□□□ 1.43
SF1-213ENST00000472725 TTC6Q86TZ1 520 aa23.96■■□□□ 1.43
SF1-213ENST00000472725 RUFY2Q8WXA3 655 aa23.96■■□□□ 1.43
SF1-213ENST00000472725 TLL2Q9Y6L7 1015 aa23.96■■□□□ 1.43
SF1-213ENST00000472725 RAD50Q92878 1312 aa23.95■■□□□ 1.42
SF1-213ENST00000472725 PATL2C9JE40 543 aaKnown RBP23.95■■□□□ 1.42
SF1-213ENST00000472725 IREB2P48200 963 aaKnown RBP23.95■■□□□ 1.42
SF1-213ENST00000472725 FOXP4Q8IVH2 680 aaPredicted RBP23.95■■□□□ 1.42
SF1-213ENST00000472725 AMOTL1Q8IY63 956 aa23.95■■□□□ 1.42
SF1-213ENST00000472725 SDR42E1Q8WUS8 393 aa23.95■■□□□ 1.42
SF1-213ENST00000472725 FAM227BQ96M60 508 aa23.95■■□□□ 1.42
SF1-213ENST00000472725 SEC62Q99442 399 aaKnown RBP23.95■■□□□ 1.42
SF1-213ENST00000472725 HERC5Q9UII4 1024 aaKnown RBP23.95■■□□□ 1.42
SF1-213ENST00000472725 A0A0D9SFI3 127 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 SAPCD2Q86UD0 394 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 METTL16Q86W50 562 aaKnown RBP23.94■■□□□ 1.42
SF1-213ENST00000472725 SKAP1Q86WV1 359 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 CDAN1Q8IWY9 1227 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 ZNF341Q9BYN7 854 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 NACAP1Q9BZK3 213 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 EHD4Q9H223 541 aa23.94■■□□□ 1.42
SF1-213ENST00000472725 GSG1L2A8MUP6 293 aa23.93■■□□□ 1.42
SF1-213ENST00000472725 CHMLP26374 656 aa23.93■■□□□ 1.42
SF1-213ENST00000472725 TTLL12Q14166 644 aaPredicted RBP23.93■■□□□ 1.42
SF1-213ENST00000472725 MCM9Q9NXL9 1143 aa23.93■■□□□ 1.42
SF1-213ENST00000472725 CCDC171Q6TFL3 1326 aa23.92■■□□□ 1.42
SF1-213ENST00000472725 PRKAB2O43741 272 aa23.92■■□□□ 1.42
SF1-213ENST00000472725 USP2O75604 605 aaPredicted RBP23.92■■□□□ 1.42
SF1-213ENST00000472725 LDLRAD1Q5T700 205 aa23.92■■□□□ 1.42
SF1-213ENST00000472725 CWC27Q6UX04 472 aaKnown RBP23.92■■□□□ 1.42
SF1-213ENST00000472725 ARPP21Q9UBL0 812 aaPredicted RBP23.92■■□□□ 1.42
SF1-213ENST00000472725 PALD1Q9ULE6 856 aa23.92■■□□□ 1.42
SF1-213ENST00000472725 ABT1Q9ULW3 272 aaKnown RBP23.92■■□□□ 1.42
SF1-213ENST00000472725 ANGEL1Q9UNK9 670 aaKnown RBP23.92■■□□□ 1.42
SF1-213ENST00000472725 BAZ2AQ9UIF9 1905 aaKnown RBP23.91■■□□□ 1.42
SF1-213ENST00000472725 POLR3DP05423 398 aaPredicted RBP23.91■■□□□ 1.42
SF1-213ENST00000472725 HUNKP57058 714 aa23.91■■□□□ 1.42
SF1-213ENST00000472725 SBK1Q52WX2 424 aa23.91■■□□□ 1.42
SF1-213ENST00000472725 ANKRD13AQ8IZ07 590 aa23.91■■□□□ 1.42
SF1-213ENST00000472725 KLRG1Q96E93 195 aa23.91■■□□□ 1.42
SF1-213ENST00000472725 ZNF112Q9UJU3 913 aa23.91■■□□□ 1.42
SF1-213ENST00000472725 RASSF10A6NK89 507 aa23.9■■□□□ 1.42
SF1-213ENST00000472725 ALX1Q15699 326 aa23.9■■□□□ 1.42
SF1-213ENST00000472725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.9■■□□□ 1.42
SF1-213ENST00000472725 SAP30BPQ9UHR5 308 aaKnown RBP23.9■■□□□ 1.42
SF1-213ENST00000472725 SERPINB13Q9UIV8 391 aa23.9■■□□□ 1.42
SF1-213ENST00000472725 SIPA1L1O43166 1804 aa23.89■■□□□ 1.42
SF1-213ENST00000472725 ZMYM6O95789 1325 aa23.89■■□□□ 1.42
SF1-213ENST00000472725 APPP05067 770 aa23.89■■□□□ 1.41
SF1-213ENST00000472725 MAP3K9P80192 1104 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms