RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 PNPLA7Q6ZV29 1317 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 PPARAQ07869 468 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 VPS72Q15906 364 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
UBXN11-213ENST00000472155 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
UBXN11-213ENST00000472155 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
UBXN11-213ENST00000472155 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 ANO1Q5XXA6 986 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 TDRD7Q8NHU6 1098 aaKnown RBP17.48■□□□□ 0.39
UBXN11-213ENST00000472155 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 POLR3EQ9NVU0 708 aa17.48■□□□□ 0.39
UBXN11-213ENST00000472155 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 LRMPQ12912 555 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 MYH2Q9UKX2 1941 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
UBXN11-213ENST00000472155 ATL3Q6DD88 541 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
UBXN11-213ENST00000472155 NBPF5PQ86XG9 351 aaPredicted RBP17.47■□□□□ 0.39
UBXN11-213ENST00000472155 NUP133Q8WUM0 1156 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 ARHGEF1Q92888 912 aaKnown RBP17.47■□□□□ 0.39
UBXN11-213ENST00000472155 TRIM5Q9C035 493 aa17.47■□□□□ 0.39
UBXN11-213ENST00000472155 CNTNAP4Q9C0A0 1308 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 BIN1O00499 593 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 LIFRP42702 1097 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 ISM2Q6H9L7 571 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 SHISA4Q96DD7 197 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 NARFQ9UHQ1 456 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 CHAF1AQ13111 956 aaPredicted RBP17.46■□□□□ 0.39
UBXN11-213ENST00000472155 UBE4AQ14139 1066 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 SETDB2Q96T68 719 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
UBXN11-213ENST00000472155 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
UBXN11-213ENST00000472155 BTAF1O14981 1849 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 PRDX5P30044 214 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 ZNF75DP51815 510 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 RPS8P62241 208 aaKnown RBP17.45■□□□□ 0.38
UBXN11-213ENST00000472155 WTAPQ15007 396 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 GPR101Q96P66 508 aaPredicted RBP17.45■□□□□ 0.38
UBXN11-213ENST00000472155 SDF4Q9BRK5 362 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 TIAM2Q8IVF5 1701 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 BTBD18B2RXH4 712 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 NOLC1Q14978 699 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBXN11-213ENST00000472155 CCDC144BQ3MJ40 725 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 SPECC1Q5M775 1068 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 CCDC186Q7Z3E2 898 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 PLA2G4DQ86XP0 818 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 DHX40Q8IX18 779 aaKnown RBP17.45■□□□□ 0.38
UBXN11-213ENST00000472155 KRT23Q9C075 422 aa17.45■□□□□ 0.38
UBXN11-213ENST00000472155 YEATS4O95619 227 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 PFKFB1P16118 471 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 ARID5BQ14865 1188 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 USP21Q9UK80 565 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 GNAT2P19087 354 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 TM4SF1P30408 202 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 PTPAQ15257 358 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 SLC10A5Q5PT55 438 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 NBPF11Q86T75 865 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 UBE2Q2Q8WVN8 375 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.44■□□□□ 0.38
UBXN11-213ENST00000472155 CNNM2Q9H8M5 875 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 MYH13Q9UKX3 1938 aa17.44■□□□□ 0.38
UBXN11-213ENST00000472155 A0A1W2PQ27 194 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 A0A1W2PQ64 194 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 A0A1W2PQD8 194 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 NMT2O60551 498 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 ZPR1O75312 459 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 ZNF202O95125 648 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 MECOMQ03112 1051 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 GRIN1Q05586 938 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 NR5A1Q13285 461 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
UBXN11-213ENST00000472155 STX1AQ16623 288 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 SHC4Q6S5L8 630 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 OXER1Q8TDS5 423 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 NLRP3Q96P20 1036 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 AATFQ9NY61 560 aaKnown RBP eCLIP17.43■□□□□ 0.38
UBXN11-213ENST00000472155 TNKSO95271 1327 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 CDKL5O76039 1030 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 FMNL1O95466 1100 aaPredicted RBP17.43■□□□□ 0.38
UBXN11-213ENST00000472155 CYP2D6P10635 497 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 SSRP1Q08945 709 aaKnown RBP17.43■□□□□ 0.38
UBXN11-213ENST00000472155 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 RTN1Q16799 776 aa17.43■□□□□ 0.38
UBXN11-213ENST00000472155 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms