RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 ZNF394Q53GI3 561 aa7.62□□□□□ -1.19
CDHR3-208ENST00000471910 ZC3H12AQ5D1E8 599 aaKnown RBP7.62□□□□□ -1.19
CDHR3-208ENST00000471910 GAL3ST3Q96A11 431 aa7.62□□□□□ -1.19
CDHR3-208ENST00000471910 PIDD1Q9HB75 910 aa7.62□□□□□ -1.19
CDHR3-208ENST00000471910 CRIM1Q9NZV1 1036 aa7.62□□□□□ -1.19
CDHR3-208ENST00000471910 PPP1R9AQ9ULJ8 1098 aa7.62□□□□□ -1.19
CDHR3-208ENST00000471910 ROBO2Q9HCK4 1378 aa7.61□□□□□ -1.19
CDHR3-208ENST00000471910 ERCC5P28715 1186 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-208ENST00000471910 ERVK-24P63145 666 aa7.61□□□□□ -1.19
CDHR3-208ENST00000471910 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
CDHR3-208ENST00000471910 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-208ENST00000471910 C2CD4AQ8NCU7 369 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-208ENST00000471910 ZNF296Q8WUU4 475 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-208ENST00000471910 GATAD2BQ8WXI9 593 aa7.61□□□□□ -1.19
CDHR3-208ENST00000471910 SPON2Q9BUD6 331 aa7.61□□□□□ -1.19
CDHR3-208ENST00000471910 TGIF2Q9GZN2 237 aa7.61□□□□□ -1.19
CDHR3-208ENST00000471910 DDX41Q9UJV9 622 aaKnown RBP7.61□□□□□ -1.19
CDHR3-208ENST00000471910 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-208ENST00000471910 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-208ENST00000471910 DCDC2CA8MYV0 355 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 BMP3P12645 472 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 RXRBP28702 533 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 RPL6Q02878 288 aaKnown RBP7.6□□□□□ -1.19
CDHR3-208ENST00000471910 PTPN11Q06124 597 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-208ENST00000471910 FBXL19Q6PCT2 694 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 BNC2Q6ZN30 1099 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-208ENST00000471910 KIAA0825Q8IV33 1275 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 MYRFLQ96LU7 910 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-208ENST00000471910 KCNF1Q9H3M0 494 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 CCSER2Q9H7U1 834 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 SSU72Q9NP77 194 aaKnown RBP7.6□□□□□ -1.19
CDHR3-208ENST00000471910 PCDHGC5Q9Y5F6 944 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 PCDHGB7Q9Y5F8 929 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 CSADQ9Y600 493 aa7.6□□□□□ -1.19
CDHR3-208ENST00000471910 RNGTTO60942 597 aaKnown RBP7.59□□□□□ -1.19
CDHR3-208ENST00000471910 F13A1P00488 732 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 ITGB2P05107 769 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 WIPI1Q5MNZ9 446 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-208ENST00000471910 FAM196AQ6ZSG2 479 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 C12orf40Q86WS4 652 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 PLPPR2Q96GM1 343 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 SPOCK3Q9BQ16 436 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 ADAMTS1Q9UHI8 967 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 ACTL7BQ9Y614 415 aa7.59□□□□□ -1.19
CDHR3-208ENST00000471910 FANCGO15287 622 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 GREM1O60565 184 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 CILPO75339 1184 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 RACK1P63244 317 aaKnown RBP7.58□□□□□ -1.2
CDHR3-208ENST00000471910 MPP2Q14168 576 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 DOC2BQ14184 412 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 MAP7Q14244 749 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 INPP5AQ14642 412 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 CWF19L2Q2TBE0 894 aaKnown RBP7.58□□□□□ -1.2
CDHR3-208ENST00000471910 LRFN4Q6PJG9 635 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 CDC37L1Q7L3B6 337 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 ARMC10Q8N2F6 343 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 RNF214Q8ND24 703 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 NT5C1AQ9BXI3 368 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-208ENST00000471910 DISC1Q9NRI5 854 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 TPSG1Q9NRR2 321 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 TACC3Q9Y6A5 838 aa7.58□□□□□ -1.2
CDHR3-208ENST00000471910 PRAMEF27A3QJZ7 478 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 FAM221AA4D161 298 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 RAB6AP20340 208 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 GARTP22102 1010 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 MAP4P27816 1152 aaKnown RBP7.57□□□□□ -1.2
CDHR3-208ENST00000471910 PDE4BQ07343 736 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 TTLL4Q14679 1199 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 PPM1JQ5JR12 505 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-208ENST00000471910 CYFIP1Q7L576 1253 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 KCT2Q8NC54 265 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 ZNF507Q8TCN5 953 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 FBLIM1Q8WUP2 373 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 STOML1Q9UBI4 398 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 PCOLCE2Q9UKZ9 415 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 RAXQ9Y2V3 346 aa7.57□□□□□ -1.2
CDHR3-208ENST00000471910 FAM95CA0A1B0GW59 222 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 ETF1P62495 437 aaKnown RBP7.56□□□□□ -1.2
CDHR3-208ENST00000471910 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 GNL2Q13823 731 aaKnown RBP7.56□□□□□ -1.2
CDHR3-208ENST00000471910 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 CDPF1Q6NVV7 123 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 PAOXQ6QHF9 649 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 SMYD4Q8IYR2 804 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-208ENST00000471910 NKD1Q969G9 470 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 SPATA32Q96LK8 384 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
CDHR3-208ENST00000471910 GFRA2O00451 464 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 TLR3O15455 904 aaKnown RBP7.55□□□□□ -1.2
CDHR3-208ENST00000471910 PROCP04070 461 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms