RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
SSR4-208ENST00000471880 UNCXA6NJT0 531 aa18.04■□□□□ 0.48
SSR4-208ENST00000471880 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
SSR4-208ENST00000471880 ENTPD3O75355 529 aa18.04■□□□□ 0.48
SSR4-208ENST00000471880 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
SSR4-208ENST00000471880 CYP7A1P22680 504 aa18.04■□□□□ 0.48
SSR4-208ENST00000471880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.04■□□□□ 0.482e-7■□□□□ 8.1
SSR4-208ENST00000471880 RFX7Q2KHR2 1363 aa18.04■□□□□ 0.48
SSR4-208ENST00000471880 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
SSR4-208ENST00000471880 MAP3K12Q12852 859 aa18.03■□□□□ 0.48
SSR4-208ENST00000471880 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
SSR4-208ENST00000471880 SH3RF3Q8TEJ3 882 aaPredicted RBP18.03■□□□□ 0.48
SSR4-208ENST00000471880 IDI2Q9BXS1 227 aa18.03■□□□□ 0.48
SSR4-208ENST00000471880 R3HDMLQ9H3Y0 253 aa18.03■□□□□ 0.48
SSR4-208ENST00000471880 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
SSR4-208ENST00000471880 DDX4Q9NQI0 724 aaKnown RBP18.03■□□□□ 0.48
SSR4-208ENST00000471880 FOCADQ5VW36 1801 aa18.02■□□□□ 0.48
SSR4-208ENST00000471880 GOLIM4O00461 696 aa18.02■□□□□ 0.48
SSR4-208ENST00000471880 INPP5BP32019 993 aa18.02■□□□□ 0.48
SSR4-208ENST00000471880 TM4SF4P48230 202 aa18.02■□□□□ 0.48
SSR4-208ENST00000471880 MIGA1Q8NAN2 632 aa18.02■□□□□ 0.48
SSR4-208ENST00000471880 SIPA1L1O43166 1804 aa18.02■□□□□ 0.47
SSR4-208ENST00000471880 DDTLA6NHG4 134 aaPredicted RBP18.01■□□□□ 0.47
SSR4-208ENST00000471880 SLURP2P0DP57 97 aa18.01■□□□□ 0.47
SSR4-208ENST00000471880 PLCG2P16885 1265 aa18.01■□□□□ 0.47
SSR4-208ENST00000471880 RHBDL3P58872 404 aa18.01■□□□□ 0.47
SSR4-208ENST00000471880 OTUD7BQ6GQQ9 843 aa18.01■□□□□ 0.47
SSR4-208ENST00000471880 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
SSR4-208ENST00000471880 SNCAIPQ9Y6H5 919 aa18.01■□□□□ 0.47
SSR4-208ENST00000471880 PTPRFP10586 1907 aa18■□□□□ 0.47
SSR4-208ENST00000471880 INHBEP58166 350 aa18■□□□□ 0.47
SSR4-208ENST00000471880 DYNLL1P63167 89 aaKnown RBP18■□□□□ 0.47
SSR4-208ENST00000471880 TTF1Q15361 905 aaPredicted RBP18■□□□□ 0.47
SSR4-208ENST00000471880 ADGRA1Q86SQ6 560 aa18■□□□□ 0.47
SSR4-208ENST00000471880 IFNL1Q8IU54 200 aa18■□□□□ 0.47
SSR4-208ENST00000471880 MAPKAPK5Q8IW41 473 aa18■□□□□ 0.47
SSR4-208ENST00000471880 TGFBRAP1Q8WUH2 860 aa18■□□□□ 0.47
SSR4-208ENST00000471880 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
SSR4-208ENST00000471880 PHIPQ8WWQ0 1821 aa18■□□□□ 0.47
SSR4-208ENST00000471880 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 SPDYE5A6NIY4 337 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 IGF2BP3O00425 579 aaKnown RBP eCLIP17.99■□□□□ 0.47
SSR4-208ENST00000471880 ALDH1A1P00352 501 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 GTF2A2P52657 109 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 DGKZQ13574 1117 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 CCL15Q16663 113 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 SLC4A8Q2Y0W8 1093 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 SH3BP5LQ7L8J4 393 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 ERO1BQ86YB8 467 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 TRIM34Q9BYJ4 488 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
SSR4-208ENST00000471880 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 ATRNL1Q5VV63 1379 aa17.99■□□□□ 0.47
SSR4-208ENST00000471880 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
SSR4-208ENST00000471880 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
SSR4-208ENST00000471880 USP5P45974 858 aa17.98■□□□□ 0.47
SSR4-208ENST00000471880 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
SSR4-208ENST00000471880 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
SSR4-208ENST00000471880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.98■□□□□ 0.47
SSR4-208ENST00000471880 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
SSR4-208ENST00000471880 SAP30BPQ9UHR5 308 aaKnown RBP17.98■□□□□ 0.47
SSR4-208ENST00000471880 DOCK1Q14185 1865 aa17.98■□□□□ 0.47
SSR4-208ENST00000471880 ZSWIM8A7E2V4 1837 aa17.98■□□□□ 0.47
SSR4-208ENST00000471880 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
SSR4-208ENST00000471880 CRACR2BQ8N4Y2 399 aaPredicted RBP17.97■□□□□ 0.47
SSR4-208ENST00000471880 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
SSR4-208ENST00000471880 PTPN18Q99952 460 aa17.97■□□□□ 0.47
SSR4-208ENST00000471880 IRF6O14896 467 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 PPIL2Q13356 520 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 SNAPC2Q13487 334 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 MS4A4AQ96JQ5 239 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 DCTPP1Q9H773 170 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 PAG1Q9NWQ8 432 aa17.96■□□□□ 0.47
SSR4-208ENST00000471880 GPR25O00155 361 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 CETPP11597 493 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 ATP5JP18859 108 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 PPP4CP60510 307 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 PPATQ06203 517 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSR4-208ENST00000471880 ZNF296Q8WUU4 475 aaPredicted RBP17.95■□□□□ 0.46
SSR4-208ENST00000471880 BRI3BPQ8WY22 251 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 ZNF112Q9UJU3 913 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 FLT1P17948 1338 aa17.95■□□□□ 0.46
SSR4-208ENST00000471880 MYH1P12882 1939 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 MAGEB6P1A0A0J9YX57 407 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 HLA-DOAP06340 250 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 PDE6AP16499 860 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 TAF1CQ15572 869 aaPredicted RBP17.94■□□□□ 0.46
SSR4-208ENST00000471880 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 SCYL3Q8IZE3 742 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSR4-208ENST00000471880 ECHDC1Q9NTX5 307 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 PALD1Q9ULE6 856 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 ZHX2Q9Y6X8 837 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 ZNF532Q9HCE3 1301 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 MYH7P12883 1935 aa17.94■□□□□ 0.46
SSR4-208ENST00000471880 TESPA1A2RU30 521 aaPredicted RBP17.93■□□□□ 0.46
SSR4-208ENST00000471880 IGSF3O75054 1194 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms