RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 NLRP3Q96P20 1036 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
APLF-204ENST00000471727 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
APLF-204ENST00000471727 KIAA1468Q9P260 1216 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
APLF-204ENST00000471727 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
APLF-204ENST00000471727 DEXIO95424 95 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 CDC27P30260 824 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 TPM4P67936 248 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 PPARAQ07869 468 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 KIAA1524Q8TCG1 905 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
APLF-204ENST00000471727 FAM217BQ9NTX9 383 aaPredicted RBP12.31□□□□□ -0.44
APLF-204ENST00000471727 MINPP1Q9UNW1 487 aa12.31□□□□□ -0.44
APLF-204ENST00000471727 BCORQ6W2J9 1755 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 KCNQ2O43526 872 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 RTN1Q16799 776 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 FBXO33Q7Z6M2 555 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 DRC7Q8IY82 874 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 SETDB2Q96T68 719 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 UBAC1Q9BSL1 405 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 RAI14Q9P0K7 980 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
APLF-204ENST00000471727 C4AP0C0L4 1744 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 C4BP0C0L5 1744 aa12.3□□□□□ -0.44
APLF-204ENST00000471727 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 SMTNL1A8MU46 457 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 KIF28PB7ZC32 967 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 SNAP23O00161 211 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 CUTAO60888 179 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 ZNF202O95125 648 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 SLC3A2P08195 630 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 XBP1P17861 261 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 NDUFA8P51970 172 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 RPS8P62241 208 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 DNTTIP2Q5QJE6 756 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 AXDND1Q5T1B0 1012 aaPredicted RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
APLF-204ENST00000471727 SLC26A6Q9BXS9 759 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 FOXP1Q9H334 677 aaPredicted RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 COL5A3P25940 1745 aaPredicted RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 PRKAB2O43741 272 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 ZPR1O75312 459 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 FGRP09769 529 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 CALM1P0DP23 149 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 CALM2P0DP24 149 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 CALM3P0DP25 149 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 FAM98CQ17RN3 349 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 RAB11FIP4Q86YS3 637 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 FAM84BQ96KN1 310 aaPredicted RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 RIOK1Q9BRS2 568 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 HOOK1Q9UJC3 728 aaKnown RBP12.29□□□□□ -0.44
APLF-204ENST00000471727 CEP131Q9UPN4 1083 aa12.29□□□□□ -0.44
APLF-204ENST00000471727 DYNC1I1O14576 645 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 MYO1BO43795 1136 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 PPFIA3O75145 1194 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 MMP1P03956 469 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 SYKP43405 635 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 NLRP12P59046 1061 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 PTPAQ15257 358 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 SPTY2D1Q68D10 685 aaPredicted RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 FANCBQ8NB91 859 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 PHKBQ93100 1093 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 ZNF830Q96NB3 372 aaPredicted RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 RNF26Q9BY78 433 aaPredicted RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 RBM28Q9NW13 759 aaKnown RBP12.28□□□□□ -0.44
APLF-204ENST00000471727 CLIP2Q9UDT6 1046 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 HPSEQ9Y251 543 aa12.28□□□□□ -0.44
APLF-204ENST00000471727 RRP9O43818 475 aaKnown RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 PFKFB1P16118 471 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 GYG1P46976 350 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 AKAP17AQ02040 695 aaKnown RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 TBC1D9BQ66K14 1250 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 NBPF5PQ86XG9 351 aaPredicted RBP12.27□□□□□ -0.44
APLF-204ENST00000471727 IQCA1Q86XH1 822 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 MAP7D2Q96T17 732 aa12.27□□□□□ -0.44
APLF-204ENST00000471727 MAP3K14Q99558 947 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms