RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 PTPN18Q99952 460 aa28.69■■■□□ 2.18
RNF220-208ENST00000471494 CCDC8Q9H0W5 538 aaPredicted RBP28.69■■■□□ 2.18
RNF220-208ENST00000471494 TLR7Q9NYK1 1049 aaKnown RBP28.69■■■□□ 2.18
RNF220-208ENST00000471494 EAF2Q96CJ1 260 aaPredicted RBP28.68■■■□□ 2.18
RNF220-208ENST00000471494 ZNF112Q9UJU3 913 aa28.68■■■□□ 2.18
RNF220-208ENST00000471494 HMMRO75330 724 aa28.67■■■□□ 2.18
RNF220-208ENST00000471494 RHBDL3P58872 404 aa28.67■■■□□ 2.18
RNF220-208ENST00000471494 CRHR2Q13324 411 aa28.67■■■□□ 2.18
RNF220-208ENST00000471494 PPIL2Q13356 520 aa28.67■■■□□ 2.18
RNF220-208ENST00000471494 RPAP2Q8IXW5 612 aaPredicted RBP28.67■■■□□ 2.18
RNF220-208ENST00000471494 NOL10Q9BSC4 688 aaKnown RBP28.67■■■□□ 2.18
RNF220-208ENST00000471494 DDX4Q9NQI0 724 aaKnown RBP28.67■■■□□ 2.18
RNF220-208ENST00000471494 ZBTB40Q9NUA8 1239 aa28.67■■■□□ 2.18
RNF220-208ENST00000471494 ATRNL1Q5VV63 1379 aa28.66■■■□□ 2.18
RNF220-208ENST00000471494 MAP4K4O95819 1239 aaPredicted RBP28.66■■■□□ 2.18
RNF220-208ENST00000471494 SNAPC2Q13487 334 aa28.66■■■□□ 2.18
RNF220-208ENST00000471494 PKN2Q16513 984 aaKnown RBP28.66■■■□□ 2.18
RNF220-208ENST00000471494 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.66■■■□□ 2.18
RNF220-208ENST00000471494 IRF6O14896 467 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 CETPP11597 493 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 PPATQ06203 517 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 NAA16Q6N069 864 aaPredicted RBP28.65■■■□□ 2.18
RNF220-208ENST00000471494 SH3BP5LQ7L8J4 393 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 AACSQ86V21 672 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 DOCK1Q14185 1865 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 CDK5RAP2Q96SN8 1893 aa28.65■■■□□ 2.18
RNF220-208ENST00000471494 CYP2E1P05181 493 aaPredicted RBP28.64■■■□□ 2.18
RNF220-208ENST00000471494 ZAP70P43403 619 aa28.64■■■□□ 2.18
RNF220-208ENST00000471494 NOL9Q5SY16 702 aaKnown RBP28.64■■■□□ 2.18
RNF220-208ENST00000471494 DDTLA6NHG4 134 aaPredicted RBP28.63■■■□□ 2.17
RNF220-208ENST00000471494 NPM3O75607 178 aaKnown RBP28.63■■■□□ 2.17
RNF220-208ENST00000471494 TAF1CQ15572 869 aaPredicted RBP28.63■■■□□ 2.17
RNF220-208ENST00000471494 FOCADQ5VW36 1801 aa28.63■■■□□ 2.17
RNF220-208ENST00000471494 PDE3AQ14432 1141 aa28.62■■■□□ 2.17
RNF220-208ENST00000471494 TEX11Q8IYF3 940 aa28.62■■■□□ 2.17
RNF220-208ENST00000471494 RHPN1Q8TCX5 695 aa28.62■■■□□ 2.17
RNF220-208ENST00000471494 COL2A1P02458 1487 aaPredicted RBP28.61■■■□□ 2.17
RNF220-208ENST00000471494 IGSF3O75054 1194 aa28.61■■■□□ 2.17
RNF220-208ENST00000471494 FAM43AQ8N2R8 423 aa28.61■■■□□ 2.17
RNF220-208ENST00000471494 ZFYVE28Q9HCC9 887 aa28.61■■■□□ 2.17
RNF220-208ENST00000471494 IL1RAPL2Q9NP60 686 aa28.61■■■□□ 2.17
RNF220-208ENST00000471494 APBB1O00213 710 aa28.6■■■□□ 2.17
RNF220-208ENST00000471494 BAG3O95817 575 aa28.6■■■□□ 2.17
RNF220-208ENST00000471494 C20orf194Q5TEA3 1177 aa28.6■■■□□ 2.17
RNF220-208ENST00000471494 ERO1AQ96HE7 468 aa28.6■■■□□ 2.17
RNF220-208ENST00000471494 PIH1D3Q9NQM4 214 aaKnown RBP28.6■■■□□ 2.17
RNF220-208ENST00000471494 PHF20L1A8MW92 1017 aa28.59■■■□□ 2.17
RNF220-208ENST00000471494 PLCG2P16885 1265 aa28.59■■■□□ 2.17
RNF220-208ENST00000471494 SIRT2Q8IXJ6 389 aa28.59■■■□□ 2.17
RNF220-208ENST00000471494 SH3RF3Q8TEJ3 882 aaPredicted RBP28.59■■■□□ 2.17
RNF220-208ENST00000471494 KIF1BPQ96EK5 621 aa28.59■■■□□ 2.17
RNF220-208ENST00000471494 OSBPL5Q9H0X9 879 aaPredicted RBP28.59■■■□□ 2.17
RNF220-208ENST00000471494 ZCCHC17Q9NP64 241 aaKnown RBP28.59■■■□□ 2.17
RNF220-208ENST00000471494 PICK1Q9NRD5 415 aa28.59■■■□□ 2.17
RNF220-208ENST00000471494 AATFQ9NY61 560 aaKnown RBP eCLIP28.59■■■□□ 2.17
RNF220-208ENST00000471494 HPS5Q9UPZ3 1129 aa28.59■■■□□ 2.17
RNF220-208ENST00000471494 ATAD5Q96QE3 1844 aa28.58■■■□□ 2.17
RNF220-208ENST00000471494 BTBD19C9JJ37 291 aa28.58■■■□□ 2.17
RNF220-208ENST00000471494 MAP3K10Q02779 954 aa28.58■■■□□ 2.17
RNF220-208ENST00000471494 FBXO46Q6PJ61 603 aaPredicted RBP28.58■■■□□ 2.17
RNF220-208ENST00000471494 SCYL3Q8IZE3 742 aa28.58■■■□□ 2.17
RNF220-208ENST00000471494 CLASRPQ8N2M8 674 aaKnown RBP28.58■■■□□ 2.17
RNF220-208ENST00000471494 KCNH4Q9UQ05 1017 aa28.58■■■□□ 2.17
RNF220-208ENST00000471494 IDH1O75874 414 aaKnown RBP28.57■■■□□ 2.16
RNF220-208ENST00000471494 SP3Q02447 781 aa28.57■■■□□ 2.16
RNF220-208ENST00000471494 TRIM17Q9Y577 477 aa28.57■■■□□ 2.16
RNF220-208ENST00000471494 PHIPQ8WWQ0 1821 aa28.57■■■□□ 2.16
RNF220-208ENST00000471494 PTPRFP10586 1907 aa28.57■■■□□ 2.16
RNF220-208ENST00000471494 CD99L2Q8TCZ2 262 aa28.56■■■□□ 2.16
RNF220-208ENST00000471494 RAB11FIP3O75154 756 aa28.55■■■□□ 2.16
RNF220-208ENST00000471494 PPP4CP60510 307 aa28.55■■■□□ 2.16
RNF220-208ENST00000471494 ADGRA1Q86SQ6 560 aa28.55■■■□□ 2.16
RNF220-208ENST00000471494 TBC1D12O60347 775 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 CTNND1O60716 968 aaKnown RBP28.54■■■□□ 2.16
RNF220-208ENST00000471494 SLURP2P0DP57 97 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 CYP7A1P22680 504 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 OTOP1Q7RTM1 612 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 BCL11AQ9H165 835 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.54■■■□□ 2.16
RNF220-208ENST00000471494 NDUFB9Q9Y6M9 179 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 SIPA1L1O43166 1804 aa28.54■■■□□ 2.16
RNF220-208ENST00000471494 CXCL11O14625 94 aa28.53■■■□□ 2.16
RNF220-208ENST00000471494 IFIT2P09913 472 aaKnown RBP28.53■■■□□ 2.16
RNF220-208ENST00000471494 ZHX2Q9Y6X8 837 aa28.53■■■□□ 2.16
RNF220-208ENST00000471494 MYH1P12882 1939 aa28.53■■■□□ 2.16
RNF220-208ENST00000471494 FAM196BA6NMK8 535 aa28.52■■■□□ 2.16
RNF220-208ENST00000471494 PTPRAP18433 802 aa28.52■■■□□ 2.16
RNF220-208ENST00000471494 MAP3K12Q12852 859 aa28.52■■■□□ 2.16
RNF220-208ENST00000471494 ANKRD23Q86SG2 305 aa28.52■■■□□ 2.16
RNF220-208ENST00000471494 TGFBRAP1Q8WUH2 860 aa28.52■■■□□ 2.16
RNF220-208ENST00000471494 TLR2O60603 784 aa28.51■■■□□ 2.15
RNF220-208ENST00000471494 RGS19P49795 217 aa28.51■■■□□ 2.15
RNF220-208ENST00000471494 MAPKAPK5Q8IW41 473 aa28.51■■■□□ 2.15
RNF220-208ENST00000471494 MAGEB6Q8N7X4 407 aa28.51■■■□□ 2.15
RNF220-208ENST00000471494 DHX36Q9H2U1 1008 aaKnown RBP28.51■■■□□ 2.15
RNF220-208ENST00000471494 ANTXR1Q9H6X2 564 aa28.51■■■□□ 2.15
RNF220-208ENST00000471494 EFCC1Q9HA90 598 aa28.51■■■□□ 2.15
RNF220-208ENST00000471494 FLT1P17948 1338 aa28.5■■■□□ 2.15
RNF220-208ENST00000471494 SOX10P56693 466 aa28.5■■■□□ 2.15
RNF220-208ENST00000471494 HERC5Q9UII4 1024 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms