RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 SUGT1Q9Y2Z0 365 aa16.15■□□□□ 0.18
LAMP1-202ENST00000471046 IL16Q14005 1332 aa16.15■□□□□ 0.18
LAMP1-202ENST00000471046 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
LAMP1-202ENST00000471046 TNPO2O14787 897 aaKnown RBP16.14■□□□□ 0.17
LAMP1-202ENST00000471046 VAMP4O75379 141 aa16.14■□□□□ 0.17
LAMP1-202ENST00000471046 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
LAMP1-202ENST00000471046 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
LAMP1-202ENST00000471046 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.17
LAMP1-202ENST00000471046 FAM198AQ9UFP1 575 aa16.14■□□□□ 0.17
LAMP1-202ENST00000471046 DAGLAQ9Y4D2 1042 aa16.14■□□□□ 0.17
LAMP1-202ENST00000471046 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
LAMP1-202ENST00000471046 CAVIN4Q5BKX8 364 aa16.13■□□□□ 0.17
LAMP1-202ENST00000471046 METTL24Q5JXM2 366 aa16.13■□□□□ 0.17
LAMP1-202ENST00000471046 CDC42EP5Q6NZY7 148 aa16.13■□□□□ 0.17
LAMP1-202ENST00000471046 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
LAMP1-202ENST00000471046 C9orf78Q9NZ63 289 aaPredicted RBP16.13■□□□□ 0.17
LAMP1-202ENST00000471046 COL2A1P02458 1487 aaPredicted RBP16.13■□□□□ 0.17
LAMP1-202ENST00000471046 CDK5RAP2Q96SN8 1893 aa16.13■□□□□ 0.17
LAMP1-202ENST00000471046 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
LAMP1-202ENST00000471046 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 SYN1P17600 705 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 DIXDC1Q155Q3 683 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 TDHQ8IZJ6 230 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 SLC45A1Q9Y2W3 748 aa16.12■□□□□ 0.17
LAMP1-202ENST00000471046 PHF20L1A8MW92 1017 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 ALDH1L1O75891 902 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 PDE8BO95263 885 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
LAMP1-202ENST00000471046 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 ANKLE1Q8NAG6 615 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
LAMP1-202ENST00000471046 AFG3L2Q9Y4W6 797 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
LAMP1-202ENST00000471046 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
LAMP1-202ENST00000471046 PTPRAP18433 802 aa16.1■□□□□ 0.17
LAMP1-202ENST00000471046 FGFR2P21802 821 aa16.1■□□□□ 0.17
LAMP1-202ENST00000471046 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
LAMP1-202ENST00000471046 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
LAMP1-202ENST00000471046 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.1■□□□□ 0.17
LAMP1-202ENST00000471046 SLURP2P0DP57 97 aa16.09■□□□□ 0.17
LAMP1-202ENST00000471046 PRDX5P30044 214 aa16.09■□□□□ 0.17
LAMP1-202ENST00000471046 EXOSC9Q06265 439 aaKnown RBP16.09■□□□□ 0.17
LAMP1-202ENST00000471046 TRIM32Q13049 653 aa16.09■□□□□ 0.17
LAMP1-202ENST00000471046 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
LAMP1-202ENST00000471046 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
LAMP1-202ENST00000471046 UTYO14607 1347 aa16.09■□□□□ 0.17
LAMP1-202ENST00000471046 HMGCRP04035 888 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.16
LAMP1-202ENST00000471046 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.16
LAMP1-202ENST00000471046 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 KLHDC4Q8TBB5 520 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 COA7Q96BR5 231 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 PFASO15067 1338 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
LAMP1-202ENST00000471046 CDH23Q9H251 3354 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 FAM110CQ1W6H9 321 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 TREML2Q5T2D2 321 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 SH3BP5LQ7L8J4 393 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 WDR66Q8TBY9 1149 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 UBE2OQ9C0C9 1292 aaKnown RBP16.07■□□□□ 0.16
LAMP1-202ENST00000471046 C11orf49Q9H6J7 331 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 AGTPBP1Q9UPW5 1226 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 RLFQ13129 1914 aa16.07■□□□□ 0.16
LAMP1-202ENST00000471046 RPTORQ8N122 1335 aa16.06■□□□□ 0.16
LAMP1-202ENST00000471046 RGS3P49796 1198 aa16.06■□□□□ 0.16
LAMP1-202ENST00000471046 PUM3Q15397 648 aaKnown RBP16.06■□□□□ 0.16
LAMP1-202ENST00000471046 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
LAMP1-202ENST00000471046 GUCD1Q96NT3 240 aa16.06■□□□□ 0.16
LAMP1-202ENST00000471046 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
LAMP1-202ENST00000471046 TRIM75PA6NK02 468 aa16.05■□□□□ 0.16
LAMP1-202ENST00000471046 IFIT1P09914 478 aaKnown RBP16.05■□□□□ 0.16
LAMP1-202ENST00000471046 MAP3K10Q02779 954 aa16.05■□□□□ 0.16
LAMP1-202ENST00000471046 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
LAMP1-202ENST00000471046 TRIB2Q92519 343 aa16.04■□□□□ 0.16
LAMP1-202ENST00000471046 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
LAMP1-202ENST00000471046 HMX1Q9NP08 348 aaPredicted RBP16.04■□□□□ 0.16
LAMP1-202ENST00000471046 GJD2Q9UKL4 321 aa16.04■□□□□ 0.16
LAMP1-202ENST00000471046 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
LAMP1-202ENST00000471046 ENTPD3O75355 529 aa16.03■□□□□ 0.16
LAMP1-202ENST00000471046 LDHBP07195 334 aaKnown RBP16.03■□□□□ 0.16
LAMP1-202ENST00000471046 SLC5A1P13866 664 aa16.03■□□□□ 0.16
LAMP1-202ENST00000471046 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
LAMP1-202ENST00000471046 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
LAMP1-202ENST00000471046 GAKO14976 1311 aa16.02■□□□□ 0.16
LAMP1-202ENST00000471046 SALL1Q9NSC2 1324 aa16.02■□□□□ 0.16
LAMP1-202ENST00000471046 MUC3AQ02505 3323 aa16.02■□□□□ 0.16
LAMP1-202ENST00000471046 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
LAMP1-202ENST00000471046 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.16
LAMP1-202ENST00000471046 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
LAMP1-202ENST00000471046 PNMA3Q9UL41 463 aa16.02■□□□□ 0.16
LAMP1-202ENST00000471046 LRRFIP2Q9Y608 721 aaKnown RBP16.02■□□□□ 0.16
LAMP1-202ENST00000471046 CTNND1O60716 968 aaKnown RBP16.01■□□□□ 0.15
LAMP1-202ENST00000471046 COL6A1P12109 1028 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms