RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 LAMB1P07942 1786 aa19.15■□□□□ 0.66
HDAC6-218ENST00000470942 CAPN15O75808 1086 aa19.15■□□□□ 0.66
HDAC6-218ENST00000470942 IDH1O75874 414 aaKnown RBP19.15■□□□□ 0.66
HDAC6-218ENST00000470942 BAG3O95817 575 aa19.15■□□□□ 0.66
HDAC6-218ENST00000470942 MAP4K4O95819 1239 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-218ENST00000470942 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
HDAC6-218ENST00000470942 OTUD5Q96G74 571 aa19.15■□□□□ 0.66
HDAC6-218ENST00000470942 INPP5BP32019 993 aa19.14■□□□□ 0.65
HDAC6-218ENST00000470942 IFNL1Q8IU54 200 aa19.14■□□□□ 0.65
HDAC6-218ENST00000470942 AATFQ9NY61 560 aaKnown RBP eCLIP19.14■□□□□ 0.652e-7■■■■■ 44.3
HDAC6-218ENST00000470942 SNCAIPQ9Y6H5 919 aa19.14■□□□□ 0.65
HDAC6-218ENST00000470942 RFX7Q2KHR2 1363 aa19.14■□□□□ 0.65
HDAC6-218ENST00000470942 DDTLA6NHG4 134 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-218ENST00000470942 ALDH1A1P00352 501 aa19.13■□□□□ 0.65
HDAC6-218ENST00000470942 OTUD7BQ6GQQ9 843 aa19.13■□□□□ 0.65
HDAC6-218ENST00000470942 SH3BP5LQ7L8J4 393 aa19.13■□□□□ 0.65
HDAC6-218ENST00000470942 ERO1BQ86YB8 467 aa19.13■□□□□ 0.65
HDAC6-218ENST00000470942 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-218ENST00000470942 LRRCC1Q9C099 1032 aa19.13■□□□□ 0.65
HDAC6-218ENST00000470942 ANTXR1Q9H6X2 564 aa19.13■□□□□ 0.65
HDAC6-218ENST00000470942 SPDYE5A6NIY4 337 aa19.12■□□□□ 0.65
HDAC6-218ENST00000470942 IGF2BP3O00425 579 aaKnown RBP eCLIP19.12■□□□□ 0.65
HDAC6-218ENST00000470942 IGSF3O75054 1194 aa19.12■□□□□ 0.65
HDAC6-218ENST00000470942 PLCG2P16885 1265 aa19.12■□□□□ 0.65
HDAC6-218ENST00000470942 CYP7A1P22680 504 aa19.12■□□□□ 0.65
HDAC6-218ENST00000470942 ADGRA1Q86SQ6 560 aa19.12■□□□□ 0.65
HDAC6-218ENST00000470942 ZNF112Q9UJU3 913 aa19.12■□□□□ 0.65
HDAC6-218ENST00000470942 CDK5RAP2Q96SN8 1893 aa19.11■□□□□ 0.65
HDAC6-218ENST00000470942 SMARCA5O60264 1052 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-218ENST00000470942 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
HDAC6-218ENST00000470942 GTF2A2P52657 109 aa19.11■□□□□ 0.65
HDAC6-218ENST00000470942 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
HDAC6-218ENST00000470942 DGKZQ13574 1117 aa19.11■□□□□ 0.65
HDAC6-218ENST00000470942 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
HDAC6-218ENST00000470942 DNAJC2Q99543 621 aaKnown RBP19.11■□□□□ 0.65
HDAC6-218ENST00000470942 CCL15-CCL14A0A0B4J2E2 113 aa19.1■□□□□ 0.65
HDAC6-218ENST00000470942 PPP4CP60510 307 aa19.1■□□□□ 0.65
HDAC6-218ENST00000470942 TTF1Q15361 905 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-218ENST00000470942 CCL15Q16663 113 aa19.1■□□□□ 0.65
HDAC6-218ENST00000470942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.1■□□□□ 0.65
HDAC6-218ENST00000470942 MS4A4AQ96JQ5 239 aa19.1■□□□□ 0.65
HDAC6-218ENST00000470942 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
HDAC6-218ENST00000470942 OSBPL5Q9H0X9 879 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-218ENST00000470942 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
HDAC6-218ENST00000470942 TESPA1A2RU30 521 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-218ENST00000470942 GPR25O00155 361 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 SLURP2P0DP57 97 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 DYNLL1P63167 89 aaKnown RBP19.09■□□□□ 0.65
HDAC6-218ENST00000470942 PPATQ06203 517 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 PPIL2Q13356 520 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 TGFBRAP1Q8WUH2 860 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 PTPN18Q99952 460 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 R3HDMLQ9H3Y0 253 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 PCDHB15Q9Y5E8 787 aa19.09■□□□□ 0.65
HDAC6-218ENST00000470942 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
HDAC6-218ENST00000470942 GOLIM4O00461 696 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 IRF6O14896 467 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 NOL9Q5SY16 702 aaKnown RBP19.08■□□□□ 0.64
HDAC6-218ENST00000470942 MAPKAPK5Q8IW41 473 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 ZNF296Q8WUU4 475 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-218ENST00000470942 BRI3BPQ8WY22 251 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 CFHR5Q9BXR6 569 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 MCOLN1Q9GZU1 580 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 BOLA2Q9H3K6 86 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.08■□□□□ 0.64
HDAC6-218ENST00000470942 FOCADQ5VW36 1801 aa19.08■□□□□ 0.64
HDAC6-218ENST00000470942 PHF20L1A8MW92 1017 aa19.07■□□□□ 0.64
HDAC6-218ENST00000470942 CETPP11597 493 aa19.07■□□□□ 0.64
HDAC6-218ENST00000470942 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
HDAC6-218ENST00000470942 SNAPC2Q13487 334 aa19.07■□□□□ 0.64
HDAC6-218ENST00000470942 ABHD8Q96I13 439 aa19.07■□□□□ 0.64
HDAC6-218ENST00000470942 PICK1Q9NRD5 415 aa19.07■□□□□ 0.64
HDAC6-218ENST00000470942 COL2A1P02458 1487 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-218ENST00000470942 FAM196BA6NMK8 535 aa19.06■□□□□ 0.64
HDAC6-218ENST00000470942 FKTNO75072 461 aa19.06■□□□□ 0.64
HDAC6-218ENST00000470942 ATP5JP18859 108 aa19.06■□□□□ 0.64
HDAC6-218ENST00000470942 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-218ENST00000470942 SCYL3Q8IZE3 742 aa19.06■□□□□ 0.64
HDAC6-218ENST00000470942 PAG1Q9NWQ8 432 aa19.06■□□□□ 0.64
HDAC6-218ENST00000470942 MYH1P12882 1939 aa19.06■□□□□ 0.64
HDAC6-218ENST00000470942 DOCK1Q14185 1865 aa19.05■□□□□ 0.64
HDAC6-218ENST00000470942 TBC1D12O60347 775 aa19.05■□□□□ 0.64
HDAC6-218ENST00000470942 CTNND1O60716 968 aaKnown RBP19.05■□□□□ 0.64
HDAC6-218ENST00000470942 USP5P45974 858 aa19.05■□□□□ 0.64
HDAC6-218ENST00000470942 CRHR2Q13324 411 aa19.05■□□□□ 0.64
HDAC6-218ENST00000470942 NOM1Q5C9Z4 860 aaKnown RBP19.05■□□□□ 0.64
HDAC6-218ENST00000470942 SLC9C2Q5TAH2 1124 aa19.05■□□□□ 0.64
HDAC6-218ENST00000470942 CERS3Q8IU89 383 aa19.05■□□□□ 0.64
HDAC6-218ENST00000470942 EDC3Q96F86 508 aaKnown RBP19.05■□□□□ 0.64
HDAC6-218ENST00000470942 DHX36Q9H2U1 1008 aaKnown RBP19.05■□□□□ 0.64
HDAC6-218ENST00000470942 FLT1P17948 1338 aa19.04■□□□□ 0.64
HDAC6-218ENST00000470942 PDE6AP16499 860 aa19.04■□□□□ 0.64
HDAC6-218ENST00000470942 TAF1CQ15572 869 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-218ENST00000470942 CTU1Q7Z7A3 348 aaKnown RBP19.04■□□□□ 0.64
HDAC6-218ENST00000470942 FAM43AQ8N2R8 423 aa19.04■□□□□ 0.64
HDAC6-218ENST00000470942 HAUS7Q99871 368 aa19.04■□□□□ 0.64
HDAC6-218ENST00000470942 PI4KBQ9UBF8 816 aa19.04■□□□□ 0.64
HDAC6-218ENST00000470942 SAP30BPQ9UHR5 308 aaKnown RBP19.04■□□□□ 0.64
HDAC6-218ENST00000470942 ATAD5Q96QE3 1844 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms