RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
NXF3-205ENST00000470724 ZNF341Q9BYN7 854 aa11.65□□□□□ -0.54
NXF3-205ENST00000470724 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
NXF3-205ENST00000470724 IGSF3O75054 1194 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 USP2O75604 605 aaPredicted RBP11.64□□□□□ -0.55
NXF3-205ENST00000470724 MBD4O95243 580 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 PDE1AP54750 535 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 MAP3K9P80192 1104 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 NUCB1Q02818 461 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 NOGQ13253 232 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 SLFNL1Q499Z3 407 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 RASAL3Q86YV0 1011 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 ANKRD13AQ8IZ07 590 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 CRACR2BQ8N4Y2 399 aaPredicted RBP11.64□□□□□ -0.55
NXF3-205ENST00000470724 RILPL2Q969X0 211 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 HHIPL1Q96JK4 782 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
NXF3-205ENST00000470724 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
NXF3-205ENST00000470724 ARMT1Q9H993 441 aa11.64□□□□□ -0.55
NXF3-205ENST00000470724 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
NXF3-205ENST00000470724 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
NXF3-205ENST00000470724 HLA-DOAP06340 250 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 SLC10A3P09131 477 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 ADD2P35612 726 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 PPP4CP60510 307 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
NXF3-205ENST00000470724 LCORLQ8N3X6 602 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 KBTBD3Q8NAB2 608 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 PI4K2BQ8TCG2 481 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
NXF3-205ENST00000470724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.63□□□□□ -0.55
NXF3-205ENST00000470724 SSC5DA1L4H1 1573 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 FLT1P17948 1338 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 CHGBP05060 677 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 MAP2K1Q02750 393 aaPredicted RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 SH3BP5LQ7L8J4 393 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 AMOTL1Q8IY63 956 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 CCDC136Q96JN2 1154 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 PALD1Q9ULE6 856 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
NXF3-205ENST00000470724 PAPPA2Q9BXP8 1791 aa11.62□□□□□ -0.55
NXF3-205ENST00000470724 APPP05067 770 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 ZFYP08048 801 aaPredicted RBP11.61□□□□□ -0.55
NXF3-205ENST00000470724 INPP5BP32019 993 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 MAP2K2P36507 400 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 VGLL4Q14135 290 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 LDLRAD1Q5T700 205 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 SDR42E1Q8WUS8 393 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 EVI5LQ96CN4 794 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 OPTNQ96CV9 577 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 ZIC5Q96T25 663 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 MCM9Q9NXL9 1143 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 STAP2Q9UGK3 403 aa11.61□□□□□ -0.55
NXF3-205ENST00000470724 TCRBV5S4A2TA0A5A2 114 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 PRKAB2O43741 272 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 SLURP2P0DP57 97 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 MAP3K11Q16584 847 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
NXF3-205ENST00000470724 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.6□□□□□ -0.55
NXF3-205ENST00000470724 WNK4Q96J92 1243 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 RIOK1Q9BRS2 568 aaKnown RBP11.6□□□□□ -0.55
NXF3-205ENST00000470724 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
NXF3-205ENST00000470724 DHX36Q9H2U1 1008 aaKnown RBP11.6□□□□□ -0.55
NXF3-205ENST00000470724 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
NXF3-205ENST00000470724 RFX7Q2KHR2 1363 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 FAM155AB1AL88 458 aaPredicted RBP11.59□□□□□ -0.55
NXF3-205ENST00000470724 SREBF2Q12772 1141 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 APPBP2Q92624 585 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 PI4KBQ9UBF8 816 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 MAST2Q6P0Q8 1798 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 SALL3Q9BXA9 1300 aa11.59□□□□□ -0.55
NXF3-205ENST00000470724 M0R2C6 588 aa11.58□□□□□ -0.56
NXF3-205ENST00000470724 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
NXF3-205ENST00000470724 TDO2P48775 406 aa11.58□□□□□ -0.56
NXF3-205ENST00000470724 CENPQQ7L2Z9 268 aaPredicted RBP11.58□□□□□ -0.56
NXF3-205ENST00000470724 STK11IPQ8N1F8 1099 aa11.58□□□□□ -0.56
NXF3-205ENST00000470724 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
NXF3-205ENST00000470724 SEC62Q99442 399 aaKnown RBP11.58□□□□□ -0.56
NXF3-205ENST00000470724 SNCAIPQ9Y6H5 919 aa11.58□□□□□ -0.56
NXF3-205ENST00000470724 MYH2Q9UKX2 1941 aa11.57□□□□□ -0.56
NXF3-205ENST00000470724 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
NXF3-205ENST00000470724 UNCXA6NJT0 531 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms