RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 GTPBP6O43824 516 aaPredicted RBP6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 CUTAO60888 179 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 SSFA2P28290 1259 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 RASSF2P50749 326 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 RAB3GAP1Q15042 981 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 GBP6Q6ZN66 633 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 TMTC1Q8IUR5 882 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 TBC1D22AQ8WUA7 517 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 CTNNBL1Q8WYA6 563 aaPredicted RBP6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 NLRP3Q96P20 1036 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 NUP88Q99567 741 aaPredicted RBP6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 ESYT1Q9BSJ8 1104 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 TUBB6Q9BUF5 446 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 ATP10BO94823 1461 aa6.9□□□□□ -1.3
CCDC144A-212ENST00000470068 ZNF445P59923 1031 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 LMNB2Q03252 620 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 CNNM4Q6P4Q7 775 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 HDXQ7Z353 690 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 STK11IPQ8N1F8 1099 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 ANAPC4Q9UJX5 808 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 CA12O43570 354 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 SEC24BO95487 1268 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 GCP02774 474 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 RCAN1P53805 252 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 CCDC65Q8IXS2 484 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 KIRREL3Q8IZU9 778 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 RHPN1Q8TCX5 695 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 SMC6Q96SB8 1091 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 FAM135BQ49AJ0 1406 aa6.9□□□□□ -1.31
CCDC144A-212ENST00000470068 ARHGEF37A1IGU5 675 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SCP2P22307 547 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 CCDC93Q567U6 631 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 TMEM67Q5HYA8 995 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 KRT79Q5XKE5 535 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 RNF216Q9NWF9 866 aaPredicted RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 USP16Q9Y5T5 823 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 LRRFIP2Q9Y608 721 aaKnown RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 ATP7BP35670 1465 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 NUP153P49790 1475 aaKnown RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 FOXP2O15409 715 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 THAP12O43422 761 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 KCNQ4P56696 695 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 ILF2Q12905 390 aaKnown RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SLMAPQ14BN4 828 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SEPT2Q15019 361 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 CHADLQ6NUI6 762 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SMAP1Q8IYB5 467 aaPredicted RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 MRGBPQ9NV56 204 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 PTPRZ1P23471 2315 aaPredicted RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 PCDH11XQ9BZA7 1347 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 PCDH11YQ9BZA8 1340 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 KDM3AQ9Y4C1 1321 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 GSTTP1A0A1W2PQM5 241 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 TMEM88BA6NKF7 163 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 F8W8V4 182 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 RTN1Q16799 776 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 NUP133Q8WUM0 1156 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 NOX5Q96PH1 765 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SPC25Q9HBM1 224 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 STIM2Q9P246 746 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 NSFL1CQ9UNZ2 370 aaKnown RBP6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 TRIM17Q9Y577 477 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 F13A1P00488 732 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SLC27A3Q5K4L6 730 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 KRT25Q7Z3Z0 450 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 PPFIBP2Q8ND30 876 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 P3H4Q92791 437 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 TMEM51Q9NW97 253 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 SAMD9LQ8IVG5 1584 aa6.89□□□□□ -1.31
CCDC144A-212ENST00000470068 A0A1B0GUA9 196 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 RNF113AO15541 343 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 NOL3O60936 208 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 LMNB1P20700 586 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 TRAPPC10P48553 1259 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 BRD3Q15059 726 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 CCDC6Q16204 474 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 DAAM2Q86T65 1068 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 HOMER2Q9NSB8 354 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 GRM8O00222 908 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 EBAG9O00559 213 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 EVI5O60447 810 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 DEXIO95424 95 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 CDC37Q16543 378 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 FOXD4L5Q5VV16 416 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 MCM10Q7L590 875 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 MRPL50Q8N5N7 158 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 RETREG2Q8NC44 543 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 FOXD4L4Q8WXT5 416 aaPredicted RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 IQCGQ9H095 443 aaKnown RBP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 NT5C3AQ9H0P0 336 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 VCXQ9H320 206 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 ATG3Q9NT62 314 aa6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC144A-212ENST00000470068 NCAPD2Q15021 1401 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms