RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SLC45A1Q9Y2W3 748 aa22.85■■□□□ 1.25
TTC28-205ENST00000469670 AFG3L2Q9Y4W6 797 aa22.85■■□□□ 1.25
TTC28-205ENST00000469670 ATRNL1Q5VV63 1379 aa22.85■■□□□ 1.25
TTC28-205ENST00000469670 EYA2O00167 538 aa22.84■■□□□ 1.25
TTC28-205ENST00000469670 LDHBP07195 334 aaKnown RBP22.84■■□□□ 1.25
TTC28-205ENST00000469670 MRS2Q9HD23 443 aa22.84■■□□□ 1.25
TTC28-205ENST00000469670 PAK6Q9NQU5 681 aaPredicted RBP22.84■■□□□ 1.25
TTC28-205ENST00000469670 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
TTC28-205ENST00000469670 PAWRQ96IZ0 340 aaKnown RBP22.83■■□□□ 1.25
TTC28-205ENST00000469670 CRISPLD2Q9H0B8 497 aa22.83■■□□□ 1.25
TTC28-205ENST00000469670 TAOK2Q9UL54 1235 aa22.83■■□□□ 1.25
TTC28-205ENST00000469670 ENTPD3O75355 529 aa22.81■■□□□ 1.24
TTC28-205ENST00000469670 RFX5P48382 616 aaPredicted RBP22.81■■□□□ 1.24
TTC28-205ENST00000469670 RGS3P49796 1198 aa22.81■■□□□ 1.24
TTC28-205ENST00000469670 COA7Q96BR5 231 aa22.81■■□□□ 1.24
TTC28-205ENST00000469670 IDI2Q9BXS1 227 aa22.81■■□□□ 1.24
TTC28-205ENST00000469670 LRRFIP2Q9Y608 721 aaKnown RBP22.81■■□□□ 1.24
TTC28-205ENST00000469670 MGAMO43451 1857 aa22.81■■□□□ 1.24
TTC28-205ENST00000469670 LAMA3Q16787 3333 aa22.8■■□□□ 1.24
TTC28-205ENST00000469670 SH3BP5LQ7L8J4 393 aa22.8■■□□□ 1.24
TTC28-205ENST00000469670 NECAB2Q7Z6G3 386 aa22.8■■□□□ 1.24
TTC28-205ENST00000469670 ZSCAN29Q8IWY8 852 aaPredicted RBP22.8■■□□□ 1.24
TTC28-205ENST00000469670 USP44Q9H0E7 712 aa22.8■■□□□ 1.24
TTC28-205ENST00000469670 GNL3LQ9NVN8 582 aaKnown RBP22.8■■□□□ 1.24
TTC28-205ENST00000469670 SALL1Q9NSC2 1324 aa22.8■■□□□ 1.24
TTC28-205ENST00000469670 AK9Q5TCS8 1911 aa22.79■■□□□ 1.24
TTC28-205ENST00000469670 TRIM75PA6NK02 468 aa22.79■■□□□ 1.24
TTC28-205ENST00000469670 MAP3K10Q02779 954 aa22.79■■□□□ 1.24
TTC28-205ENST00000469670 ANKRD13CQ8N6S4 541 aa22.79■■□□□ 1.24
TTC28-205ENST00000469670 DIS3LQ8TF46 1054 aaKnown RBP22.79■■□□□ 1.24
TTC28-205ENST00000469670 GDF15Q99988 308 aa22.79■■□□□ 1.24
TTC28-205ENST00000469670 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.79■■□□□ 1.24
TTC28-205ENST00000469670 COL6A3P12111 3177 aa22.78■■□□□ 1.24
TTC28-205ENST00000469670 CTNND1O60716 968 aaKnown RBP22.78■■□□□ 1.24
TTC28-205ENST00000469670 SLURP2P0DP57 97 aa22.78■■□□□ 1.24
TTC28-205ENST00000469670 BMP8BP34820 402 aa22.78■■□□□ 1.24
TTC28-205ENST00000469670 ATG9AQ7Z3C6 839 aa22.78■■□□□ 1.24
TTC28-205ENST00000469670 MRPL50Q8N5N7 158 aaKnown RBP22.78■■□□□ 1.24
TTC28-205ENST00000469670 DENND2AQ9ULE3 1009 aa22.78■■□□□ 1.24
TTC28-205ENST00000469670 AGTPBP1Q9UPW5 1226 aa22.78■■□□□ 1.24
TTC28-205ENST00000469670 ATP2B3Q16720 1220 aa22.77■■□□□ 1.24
TTC28-205ENST00000469670 C7orf61Q8IZ16 206 aa22.77■■□□□ 1.24
TTC28-205ENST00000469670 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.77■■□□□ 1.24
TTC28-205ENST00000469670 PTPRCP08575 1304 aa22.77■■□□□ 1.24
TTC28-205ENST00000469670 RFX7Q2KHR2 1363 aa22.76■■□□□ 1.23
TTC28-205ENST00000469670 DDTLA6NHG4 134 aaPredicted RBP22.76■■□□□ 1.23
TTC28-205ENST00000469670 MNX1P50219 401 aaPredicted RBP22.76■■□□□ 1.23
TTC28-205ENST00000469670 FAM110CQ1W6H9 321 aa22.76■■□□□ 1.23
TTC28-205ENST00000469670 GPR153Q6NV75 609 aa22.76■■□□□ 1.23
TTC28-205ENST00000469670 CCDC84Q86UT8 332 aaPredicted RBP22.76■■□□□ 1.23
TTC28-205ENST00000469670 ANKLE1Q8NAG6 615 aa22.76■■□□□ 1.23
TTC28-205ENST00000469670 ZMYND8Q9ULU4 1186 aaPredicted RBP22.76■■□□□ 1.23
TTC28-205ENST00000469670 GAKO14976 1311 aa22.76■■□□□ 1.23
TTC28-205ENST00000469670 SEMA3EO15041 775 aa22.75■■□□□ 1.23
TTC28-205ENST00000469670 PHKA1P46020 1223 aa22.75■■□□□ 1.23
TTC28-205ENST00000469670 TREML2Q5T2D2 321 aa22.75■■□□□ 1.23
TTC28-205ENST00000469670 CEP126Q9P2H0 1117 aa22.75■■□□□ 1.23
TTC28-205ENST00000469670 PNMA3Q9UL41 463 aa22.75■■□□□ 1.23
TTC28-205ENST00000469670 MYH13Q9UKX3 1938 aa22.74■■□□□ 1.23
TTC28-205ENST00000469670 PICALMQ13492 652 aa22.74■■□□□ 1.23
TTC28-205ENST00000469670 ZGPATQ8N5A5 531 aaKnown RBP22.74■■□□□ 1.23
TTC28-205ENST00000469670 DEFB123Q8N688 67 aa22.74■■□□□ 1.23
TTC28-205ENST00000469670 SIL1Q9H173 461 aa22.74■■□□□ 1.23
TTC28-205ENST00000469670 DDX4Q9NQI0 724 aaKnown RBP22.74■■□□□ 1.23
TTC28-205ENST00000469670 DOCK2Q92608 1830 aa22.73■■□□□ 1.23
TTC28-205ENST00000469670 A0A0C4DFX4 3053 aa22.73■■□□□ 1.23
TTC28-205ENST00000469670 HMGCRP04035 888 aa22.73■■□□□ 1.23
TTC28-205ENST00000469670 NBPF3Q9H094 633 aa22.73■■□□□ 1.23
TTC28-205ENST00000469670 FBXO3Q9UK99 471 aa22.73■■□□□ 1.23
TTC28-205ENST00000469670 CIAO1O76071 339 aa22.72■■□□□ 1.23
TTC28-205ENST00000469670 DZIP1Q86YF9 867 aaKnown RBP22.72■■□□□ 1.23
TTC28-205ENST00000469670 PROCA1Q8NCQ7 364 aaPredicted RBP22.72■■□□□ 1.23
TTC28-205ENST00000469670 BTDP43251 543 aa22.71■■□□□ 1.23
TTC28-205ENST00000469670 Q7L0L9 218 aa22.71■■□□□ 1.23
TTC28-205ENST00000469670 SLF2Q8IX21 1173 aa22.71■■□□□ 1.23
TTC28-205ENST00000469670 FAM163AQ96GL9 167 aaPredicted RBP22.71■■□□□ 1.23
TTC28-205ENST00000469670 HMX1Q9NP08 348 aaPredicted RBP22.71■■□□□ 1.23
TTC28-205ENST00000469670 RPTORQ8N122 1335 aa22.71■■□□□ 1.23
TTC28-205ENST00000469670 ZBTB22O15209 634 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 SYN1P17600 705 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 GCLCP48506 637 aaPredicted RBP22.7■■□□□ 1.22
TTC28-205ENST00000469670 TRIM32Q13049 653 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 LRIT3Q3SXY7 679 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 ABCF2Q9UG63 623 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 GJD2Q9UKL4 321 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 ALPK3Q96L96 1907 aa22.7■■□□□ 1.22
TTC28-205ENST00000469670 CUL9Q8IWT3 2517 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 DOCK1Q14185 1865 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 TBC1D12O60347 775 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 ADORA1P30542 326 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 MAGEA10P43363 369 aaPredicted RBP22.69■■□□□ 1.22
TTC28-205ENST00000469670 SPP2Q13103 211 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 CCDC102BQ68D86 513 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 C11orf49Q9H6J7 331 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 STXBP5LQ9Y2K9 1186 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 PTPRFP10586 1907 aa22.69■■□□□ 1.22
TTC28-205ENST00000469670 FAM196BA6NMK8 535 aa22.68■■□□□ 1.22
TTC28-205ENST00000469670 PABPC4Q13310 644 aaKnown RBP eCLIP22.68■■□□□ 1.22
TTC28-205ENST00000469670 RASGRF1Q13972 1273 aa22.68■■□□□ 1.22
TTC28-205ENST00000469670 TDHQ8IZJ6 230 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms