RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 EME2A4GXA9 379 aaPredicted RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 EYA2O00167 538 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 SKAP2O75563 359 aaPredicted RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 CASTP20810 708 aaKnown RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 HNRNPH1P31943 449 aaKnown RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 ZAP70P43403 619 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 ARL10Q8N8L6 244 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 ARMC2Q8NEN0 867 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 CELF1Q92879 486 aaKnown RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 CTSWP56202 376 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 BMP2KLQ5H9B9 411 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 SLC9C2Q5TAH2 1124 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 FBXW10Q5XX13 1052 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 INTS5Q6P9B9 1019 aaKnown RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 ZBTB38Q8NAP3 1195 aaPredicted RBP11.38□□□□□ -0.59
NUP50-214ENST00000469163 BABAM1Q9NWV8 329 aa11.38□□□□□ -0.59
NUP50-214ENST00000469163 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 NRDCO43847 1150 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 ZNF772Q68DY9 489 aaPredicted RBP11.37□□□□□ -0.59
NUP50-214ENST00000469163 ZNF483Q8TF39 744 aaPredicted RBP11.37□□□□□ -0.59
NUP50-214ENST00000469163 EXOC4Q96A65 974 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 MMP10P09238 476 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NUP50-214ENST00000469163 PHKA1P46020 1223 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 REXO1L1PQ8IX06 675 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 MRFAP1Q9Y605 127 aa11.37□□□□□ -0.59
NUP50-214ENST00000469163 GOLGA6CA6NDK9 693 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 GOLGA6BA6NDN3 693 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 GOLGA6DP0CG33 693 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 GCFC2P16383 781 aaKnown RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 ZKSCAN1P17029 563 aaPredicted RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 PARD3BQ8TEW8 1205 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 ZBTB10Q96DT7 871 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 MAF1Q9H063 256 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 GDPD2Q9HCC8 539 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 GOLGA6AQ9NYA3 693 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 A0A087WUV0 522 aaPredicted RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 RAB11FIP3O75154 756 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 CEBPZQ03701 1054 aaKnown RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 NECAB1Q8N987 351 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 TTLL11Q8NHH1 800 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 IL25Q9H293 177 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 VPS37CA5D8V6 355 aaPredicted RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 RXRAP19793 462 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 LRRC31Q6UY01 552 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 CRACR2AQ9BSW2 395 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 KIF9Q9HAQ2 790 aa11.36□□□□□ -0.59
NUP50-214ENST00000469163 CHCHD3Q9NX63 227 aaKnown RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
NUP50-214ENST00000469163 TRPM3Q9HCF6 1732 aaPredicted RBP11.35□□□□□ -0.59
NUP50-214ENST00000469163 ST18O60284 1047 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 PDE8AO60658 829 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 SCARF1Q14162 830 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 KCNB2Q92953 911 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 ODF2LQ9ULJ1 636 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 H2AFXP16104 143 aaPredicted RBP11.35□□□□□ -0.59
NUP50-214ENST00000469163 SCRN1Q12765 414 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 FERMT3Q86UX7 667 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 MYLK4Q86YV6 388 aaPredicted RBP11.35□□□□□ -0.59
NUP50-214ENST00000469163 RUFY2Q8WXA3 655 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 TSPAN18Q96SJ8 248 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 TMEM165Q9HC07 324 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 VPS18Q9P253 973 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 PPFIA2O75334 1257 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 PRDM1O75626 825 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 PYGLP06737 847 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 CHRNA5P30532 468 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 RPS6KA3P51812 740 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 CLNS1AP54105 237 aaKnown RBP11.35□□□□□ -0.59
NUP50-214ENST00000469163 FILIP1Q7Z7B0 1213 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 UBXN4Q92575 508 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.59
NUP50-214ENST00000469163 SPATA31A6Q5VVP1 1343 aa11.35□□□□□ -0.59
NUP50-214ENST00000469163 CHMLP26374 656 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 IL15P40933 162 aaPredicted RBP11.34□□□□□ -0.59
NUP50-214ENST00000469163 NFIXQ14938 502 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 KIRREL3Q8IZU9 778 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 AIDAQ96BJ3 306 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 C21orf2O43822 256 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 OATP04181 439 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 SERPINB2P05120 415 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 GUCY1B3Q02153 619 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 ZGPATQ8N5A5 531 aaKnown RBP11.34□□□□□ -0.59
NUP50-214ENST00000469163 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 IQUBQ8NA54 791 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 CDC5LQ99459 802 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms