RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 USP27XA6NNY8 438 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 CDKL5O76039 1030 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 CMA1P23946 247 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 DPCR1Q3MIW9 517 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 SUSD4Q5VX71 490 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 NBPF11Q86T75 865 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 ZNF592Q92610 1267 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 PRDM4Q9UKN5 801 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 KIF28PB7ZC32 967 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 ZNF202O95125 648 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 BAG6P46379 1132 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 DMTNQ08495 405 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 TIGD1Q96MW7 591 aa16.43■□□□□ 0.22
SMARCD3-205ENST00000469154 MYO5AQ9Y4I1 1855 aaKnown RBP16.42■□□□□ 0.22
SMARCD3-205ENST00000469154 TTF1Q15361 905 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-205ENST00000469154 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-205ENST00000469154 ZNF512BQ96KM6 892 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-205ENST00000469154 PRDM10Q9NQV6 1147 aa16.42■□□□□ 0.22
SMARCD3-205ENST00000469154 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
SMARCD3-205ENST00000469154 PFKFB1P16118 471 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 U2AF2P26368 475 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 ADD2P35612 726 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 PARP10Q53GL7 1025 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 ANGEL1Q9UNK9 670 aaKnown RBP16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 NRDCO43847 1150 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 SMC2O95347 1197 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 KCNJ6P48051 423 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
SMARCD3-205ENST00000469154 IKBKBO14920 756 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 JMYQ8N9B5 988 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 GTPBP4Q9BZE4 634 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 SH2B2O14492 632 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 MCAMP43121 646 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 TMC6Q7Z403 805 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 KIF18AQ8NI77 898 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 ALG1Q9BT22 464 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 OGFRQ9NZT2 677 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 IFNKQ9P0W0 207 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 MROH7-TTC4A0A0A0MT08 1334 aa16.4■□□□□ 0.22
SMARCD3-205ENST00000469154 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 RGL2O15211 777 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 PPP6R2O75170 966 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 PI16Q6UXB8 463 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 NBPF3Q9H094 633 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 SCN7AQ01118 1682 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
SMARCD3-205ENST00000469154 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 NTSR2O95665 410 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 SFPQP23246 707 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 NCAPHQ15003 741 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 DOCK2Q92608 1830 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 FAM237AA0A1B0GTK4 181 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 BIN1O00499 593 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 TUBB4AP04350 444 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 GYS1P13807 737 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 SYKP43405 635 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 SLC9C2Q5TAH2 1124 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 TUBE1Q9UJT0 475 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
SMARCD3-205ENST00000469154 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 ITGA6P23229 1130 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 KRT40Q6A162 431 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 CYB5R4Q7L1T6 521 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 LRP5O75197 1615 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 GNL2Q13823 731 aaKnown RBP16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 ARMCX5Q6P1M9 558 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
SMARCD3-205ENST00000469154 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 UQCRFS1P1P0C7P4 283 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms