RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 DCPSQ96C86 337 aaKnown RBP17.62■□□□□ 0.41
DDX56-208ENST00000467318 DCP1AQ9NPI6 582 aaPredicted RBP17.62■□□□□ 0.41
DDX56-208ENST00000467318 GGA3Q9NZ52 723 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 PRKAB2O43741 272 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 CACNB3P54284 484 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 NFIAQ12857 509 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 FAM198AQ9UFP1 575 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
DDX56-208ENST00000467318 FLT1P17948 1338 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 TCP10L2B9ZVM9 353 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 EPB41L2O43491 1005 aaKnown RBP17.61■□□□□ 0.41
DDX56-208ENST00000467318 DEKP35659 375 aaKnown RBP17.61■□□□□ 0.41
DDX56-208ENST00000467318 PICALMQ13492 652 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 ALX1Q15699 326 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 VPS53Q5VIR6 699 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 LDHDQ86WU2 507 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 IFNL3Q8IZI9 196 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 FAM151AQ8WW52 585 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
DDX56-208ENST00000467318 MAPKAPK5Q8IW41 473 aa17.6■□□□□ 0.41
DDX56-208ENST00000467318 SULF1Q8IWU6 871 aa17.6■□□□□ 0.41
DDX56-208ENST00000467318 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
DDX56-208ENST00000467318 DHX36Q9H2U1 1008 aaKnown RBP17.6■□□□□ 0.41
DDX56-208ENST00000467318 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
DDX56-208ENST00000467318 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
DDX56-208ENST00000467318 PPP2R3BQ9Y5P8 575 aa17.6■□□□□ 0.41
DDX56-208ENST00000467318 ZMYM6O95789 1325 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 FOXP2O15409 715 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 TCP10Q12799 353 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 MAP4K1Q92918 833 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 NAPBQ9H115 298 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 DEFB129Q9H1M3 183 aa17.59■□□□□ 0.41
DDX56-208ENST00000467318 FGAP02671 866 aa17.58■□□□□ 0.41
DDX56-208ENST00000467318 TDO2P48775 406 aa17.58■□□□□ 0.41
DDX56-208ENST00000467318 RASA3Q14644 834 aa17.58■□□□□ 0.41
DDX56-208ENST00000467318 LSG1Q9H089 658 aaKnown RBP17.58■□□□□ 0.41
DDX56-208ENST00000467318 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.41
DDX56-208ENST00000467318 EPB41L4AQ9HCS5 686 aaPredicted RBP17.58■□□□□ 0.41
DDX56-208ENST00000467318 MCM9Q9NXL9 1143 aa17.58■□□□□ 0.41
DDX56-208ENST00000467318 ARPP21Q9UBL0 812 aaPredicted RBP17.58■□□□□ 0.41
DDX56-208ENST00000467318 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.41
DDX56-208ENST00000467318 PTH1RQ03431 593 aa17.58■□□□□ 0.4
DDX56-208ENST00000467318 SBK1Q52WX2 424 aa17.58■□□□□ 0.4
DDX56-208ENST00000467318 CDC37L1Q7L3B6 337 aa17.58■□□□□ 0.4
DDX56-208ENST00000467318 KRT26Q7Z3Y9 468 aa17.58■□□□□ 0.4
DDX56-208ENST00000467318 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
DDX56-208ENST00000467318 FOCADQ5VW36 1801 aa17.58■□□□□ 0.4
DDX56-208ENST00000467318 CNTNAP1P78357 1384 aa17.58■□□□□ 0.4
DDX56-208ENST00000467318 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
DDX56-208ENST00000467318 CDK5RAP2Q96SN8 1893 aa17.57■□□□□ 0.4
DDX56-208ENST00000467318 USP17L12C9JPN9 530 aa17.57■□□□□ 0.4
DDX56-208ENST00000467318 USP17L21D6R901 530 aa17.57■□□□□ 0.4
DDX56-208ENST00000467318 DLK2Q6UY11 383 aa17.57■□□□□ 0.4
DDX56-208ENST00000467318 TTC6Q86TZ1 520 aa17.57■□□□□ 0.4
DDX56-208ENST00000467318 ZSCAN29Q8IWY8 852 aaPredicted RBP17.57■□□□□ 0.4
DDX56-208ENST00000467318 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
DDX56-208ENST00000467318 ATRNL1Q5VV63 1379 aa17.57■□□□□ 0.4
DDX56-208ENST00000467318 POLR3DP05423 398 aaPredicted RBP17.56■□□□□ 0.4
DDX56-208ENST00000467318 BECN1Q14457 450 aa17.56■□□□□ 0.4
DDX56-208ENST00000467318 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
DDX56-208ENST00000467318 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
DDX56-208ENST00000467318 PI4KBQ9UBF8 816 aa17.56■□□□□ 0.4
DDX56-208ENST00000467318 PALD1Q9ULE6 856 aa17.56■□□□□ 0.4
DDX56-208ENST00000467318 HLA-DOAP06340 250 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 TMEM39BQ9GZU3 492 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
DDX56-208ENST00000467318 KIF3CO14782 793 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 C12orf60Q5U649 245 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 HOOK2Q96ED9 719 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
DDX56-208ENST00000467318 SAP30BPQ9UHR5 308 aaKnown RBP17.55■□□□□ 0.4
DDX56-208ENST00000467318 RBM8AQ9Y5S9 174 aaKnown RBP17.55■□□□□ 0.4
DDX56-208ENST00000467318 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
DDX56-208ENST00000467318 ZNF213O14771 459 aa17.54■□□□□ 0.4
DDX56-208ENST00000467318 IMMTQ16891 758 aaKnown RBP17.54■□□□□ 0.4
DDX56-208ENST00000467318 SUPT20HL1Q3ZLR7 823 aa17.54■□□□□ 0.4
DDX56-208ENST00000467318 MAP1SQ66K74 1059 aaPredicted RBP17.54■□□□□ 0.4
DDX56-208ENST00000467318 CHADLQ6NUI6 762 aa17.54■□□□□ 0.4
DDX56-208ENST00000467318 SH3BP5LQ7L8J4 393 aa17.54■□□□□ 0.4
DDX56-208ENST00000467318 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
DDX56-208ENST00000467318 TEPSINQ96N21 525 aa17.54■□□□□ 0.4
DDX56-208ENST00000467318 USP26Q9BXU7 913 aa17.54■□□□□ 0.4
DDX56-208ENST00000467318 MINDY4BA8MYZ0 360 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 PLCD1P51178 756 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 NECTIN1Q15223 517 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 USP48Q86UV5 1035 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 EHD4Q9H223 541 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 MYH1P12882 1939 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 BAZ2AQ9UIF9 1905 aaKnown RBP17.53■□□□□ 0.4
DDX56-208ENST00000467318 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
DDX56-208ENST00000467318 SEC24BO95487 1268 aa17.52■□□□□ 0.4
DDX56-208ENST00000467318 SLC3A2P08195 630 aaKnown RBP17.52■□□□□ 0.4
DDX56-208ENST00000467318 PPARAQ07869 468 aa17.52■□□□□ 0.4
DDX56-208ENST00000467318 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
DDX56-208ENST00000467318 CDAN1Q8IWY9 1227 aa17.52■□□□□ 0.4
DDX56-208ENST00000467318 SERPINB13Q9UIV8 391 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms