RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ZC3H12CQ9C0D7 883 aaKnown RBP8.53□□□□□ -1.04
XRN1-206ENST00000467077 CCDC86Q9H6F5 360 aaKnown RBP8.53□□□□□ -1.04
XRN1-206ENST00000467077 SSU72Q9NP77 194 aaKnown RBP8.53□□□□□ -1.04
XRN1-206ENST00000467077 RAPGEFL1Q9UHV5 662 aa8.53□□□□□ -1.04
XRN1-206ENST00000467077 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
XRN1-206ENST00000467077 FZD6O60353 706 aa8.52□□□□□ -1.05
XRN1-206ENST00000467077 GLI1P08151 1106 aa8.52□□□□□ -1.05
XRN1-206ENST00000467077 NPR3P17342 541 aa8.52□□□□□ -1.05
XRN1-206ENST00000467077 ITPKAP23677 461 aa8.52□□□□□ -1.05
XRN1-206ENST00000467077 TNKS2Q9H2K2 1166 aa8.52□□□□□ -1.05
XRN1-206ENST00000467077 CTNND2Q9UQB3 1225 aa8.52□□□□□ -1.05
XRN1-206ENST00000467077 WDR89Q96FK6 387 aaPredicted RBP8.51□□□□□ -1.05
XRN1-206ENST00000467077 GTF2IRD1Q9UHL9 959 aa8.51□□□□□ -1.05
XRN1-206ENST00000467077 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.5□□□□□ -1.05
XRN1-206ENST00000467077 BUD31P41223 144 aaPredicted RBP8.5□□□□□ -1.05
XRN1-206ENST00000467077 ECM1Q16610 540 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 KIAA0319Q5VV43 1072 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 PRR23BQ6ZRT6 265 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 TTLL10Q6ZVT0 673 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 KIRREL1Q96J84 757 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
XRN1-206ENST00000467077 NEFLP07196 543 aa8.49□□□□□ -1.05
XRN1-206ENST00000467077 PRKCSHP14314 528 aaPredicted RBP8.49□□□□□ -1.05
XRN1-206ENST00000467077 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
XRN1-206ENST00000467077 SF3B2Q13435 895 aaKnown RBP8.49□□□□□ -1.05
XRN1-206ENST00000467077 FBXO15Q8NCQ5 510 aaPredicted RBP8.49□□□□□ -1.05
XRN1-206ENST00000467077 KRT82Q9NSB4 513 aa8.49□□□□□ -1.05
XRN1-206ENST00000467077 C1QTNF9P0C862 333 aa8.48□□□□□ -1.05
XRN1-206ENST00000467077 TMEM67Q5HYA8 995 aa8.48□□□□□ -1.05
XRN1-206ENST00000467077 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
XRN1-206ENST00000467077 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
XRN1-206ENST00000467077 ZNF862O60290 1169 aa8.47□□□□□ -1.05
XRN1-206ENST00000467077 GSTP1P09211 210 aaKnown RBP8.47□□□□□ -1.05
XRN1-206ENST00000467077 RPS26P11Q5JNZ5 115 aaPredicted RBP8.47□□□□□ -1.05
XRN1-206ENST00000467077 FYB2Q5VWT5 728 aa8.47□□□□□ -1.05
XRN1-206ENST00000467077 CYFIP1Q7L576 1253 aa8.47□□□□□ -1.05
XRN1-206ENST00000467077 GNAT3A8MTJ3 354 aa8.46□□□□□ -1.06
XRN1-206ENST00000467077 ISL2Q96A47 359 aa8.46□□□□□ -1.06
XRN1-206ENST00000467077 NPHS2Q9NP85 383 aa8.46□□□□□ -1.06
XRN1-206ENST00000467077 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
XRN1-206ENST00000467077 INHBBP09529 407 aa8.45□□□□□ -1.06
XRN1-206ENST00000467077 ZNF157P51786 506 aaPredicted RBP8.45□□□□□ -1.06
XRN1-206ENST00000467077 CLCN7P51798 805 aa8.45□□□□□ -1.06
XRN1-206ENST00000467077 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
XRN1-206ENST00000467077 NSUN3Q9H649 340 aaKnown RBP8.45□□□□□ -1.06
XRN1-206ENST00000467077 NPIPB6E9PJ23 425 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 IGF2BP3O00425 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
XRN1-206ENST00000467077 NEFMP07197 916 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 TMEM253P0C7T8 217 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 CTSWP56202 376 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 FKBP4Q02790 459 aaKnown RBP eCLIP8.44□□□□□ -1.06
XRN1-206ENST00000467077 CIAPIN1Q6FI81 312 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 KCNB2Q92953 911 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 HEXIM2Q96MH2 286 aaKnown RBP8.44□□□□□ -1.06
XRN1-206ENST00000467077 DIRC2Q96SL1 478 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
XRN1-206ENST00000467077 ABL1P00519 1130 aa8.43□□□□□ -1.06
XRN1-206ENST00000467077 PPP2R3AQ06190 1150 aa8.43□□□□□ -1.06
XRN1-206ENST00000467077 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
XRN1-206ENST00000467077 CCDC97Q96F63 343 aaPredicted RBP8.43□□□□□ -1.06
XRN1-206ENST00000467077 TCAF2A6NFQ2 919 aa8.42□□□□□ -1.06
XRN1-206ENST00000467077 PRPF40BQ6NWY9 871 aaKnown RBP8.42□□□□□ -1.06
XRN1-206ENST00000467077 RNF214Q8ND24 703 aa8.42□□□□□ -1.06
XRN1-206ENST00000467077 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
XRN1-206ENST00000467077 GPN3Q9UHW5 284 aaPredicted RBP8.42□□□□□ -1.06
XRN1-206ENST00000467077 TRAK1Q9UPV9 953 aa8.42□□□□□ -1.06
XRN1-206ENST00000467077 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
XRN1-206ENST00000467077 CPNE3O75131 537 aaKnown RBP8.41□□□□□ -1.06
XRN1-206ENST00000467077 SSFA2P28290 1259 aa8.41□□□□□ -1.06
XRN1-206ENST00000467077 KCNA10Q16322 511 aa8.41□□□□□ -1.06
XRN1-206ENST00000467077 AMIGO3Q86WK7 504 aa8.41□□□□□ -1.06
XRN1-206ENST00000467077 CARS2Q9HA77 564 aaKnown RBP8.41□□□□□ -1.06
XRN1-206ENST00000467077 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
XRN1-206ENST00000467077 KRT1P04264 644 aa8.4□□□□□ -1.06
XRN1-206ENST00000467077 CCDC120Q96HB5 630 aa8.4□□□□□ -1.06
XRN1-206ENST00000467077 EPB41L4BQ9H329 900 aa8.4□□□□□ -1.06
XRN1-206ENST00000467077 PRDM10Q9NQV6 1147 aa8.4□□□□□ -1.06
XRN1-206ENST00000467077 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
XRN1-206ENST00000467077 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 ERVK-24P63145 666 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 FAAP100Q0VG06 881 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 ZNF211Q13398 564 aaPredicted RBP8.39□□□□□ -1.07
XRN1-206ENST00000467077 NKPD1Q17RQ9 610 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 FOXQ1Q9C009 403 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 DCP1AQ9NPI6 582 aaPredicted RBP8.39□□□□□ -1.07
XRN1-206ENST00000467077 ANO2Q9NQ90 1003 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 PICK1Q9NRD5 415 aa8.39□□□□□ -1.07
XRN1-206ENST00000467077 GDNFP39905 211 aa8.38□□□□□ -1.07
XRN1-206ENST00000467077 ATG14Q6ZNE5 492 aa8.38□□□□□ -1.07
XRN1-206ENST00000467077 ACSBG1Q96GR2 724 aa8.38□□□□□ -1.07
XRN1-206ENST00000467077 PRDM5Q9NQX1 630 aaPredicted RBP8.38□□□□□ -1.07
XRN1-206ENST00000467077 ZC3H12AQ5D1E8 599 aaKnown RBP8.37□□□□□ -1.07
XRN1-206ENST00000467077 DTHD1Q6ZMT9 781 aa8.37□□□□□ -1.07
XRN1-206ENST00000467077 CD320Q9NPF0 282 aa8.37□□□□□ -1.07
XRN1-206ENST00000467077 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
XRN1-206ENST00000467077 NUAK1O60285 661 aa8.36□□□□□ -1.07
XRN1-206ENST00000467077 RAC2P15153 192 aa8.36□□□□□ -1.07
XRN1-206ENST00000467077 ORC1Q13415 861 aa8.36□□□□□ -1.07
XRN1-206ENST00000467077 FAM214BQ7L5A3 538 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms