RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 SEC62Q99442 399 aaKnown RBP16.14■□□□□ 0.17
SYP-203ENST00000466635 TMEM39BQ9GZU3 492 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.17
SYP-203ENST00000466635 ATP8A2Q9NTI2 1148 aa16.14■□□□□ 0.17
SYP-203ENST00000466635 CNTNAP1P78357 1384 aa16.13■□□□□ 0.17
SYP-203ENST00000466635 TRAF5O00463 557 aa16.13■□□□□ 0.17
SYP-203ENST00000466635 APPP05067 770 aa16.13■□□□□ 0.17
SYP-203ENST00000466635 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
SYP-203ENST00000466635 OSBPL5Q9H0X9 879 aaPredicted RBP16.13■□□□□ 0.17
SYP-203ENST00000466635 DHX36Q9H2U1 1008 aaKnown RBP16.13■□□□□ 0.17
SYP-203ENST00000466635 FLT1P17948 1338 aa16.13■□□□□ 0.17
SYP-203ENST00000466635 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
SYP-203ENST00000466635 PRKAB2O43741 272 aa16.12■□□□□ 0.17
SYP-203ENST00000466635 CDC45O75419 566 aa16.12■□□□□ 0.17
SYP-203ENST00000466635 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
SYP-203ENST00000466635 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
SYP-203ENST00000466635 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
SYP-203ENST00000466635 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
SYP-203ENST00000466635 RPAP1Q9BWH6 1393 aaPredicted RBP16.12■□□□□ 0.17
SYP-203ENST00000466635 HLA-DOAP06340 250 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 NBPF12Q5TAG4 269 aaPredicted RBP16.11■□□□□ 0.17
SYP-203ENST00000466635 IFFO2Q5TF58 517 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 GIMAP6Q6P9H5 292 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 CCDC129Q6ZRS4 1044 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 ZNF408Q9H9D4 720 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
SYP-203ENST00000466635 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 MYO5AQ9Y4I1 1855 aaKnown RBP16.11■□□□□ 0.17
SYP-203ENST00000466635 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 RAD50Q92878 1312 aa16.11■□□□□ 0.17
SYP-203ENST00000466635 CELF2O95319 508 aaKnown RBP16.1■□□□□ 0.17
SYP-203ENST00000466635 POLR3DP05423 398 aaPredicted RBP16.1■□□□□ 0.17
SYP-203ENST00000466635 DCAF15Q66K64 600 aa16.1■□□□□ 0.17
SYP-203ENST00000466635 DLK2Q6UY11 383 aa16.1■□□□□ 0.17
SYP-203ENST00000466635 TTC6Q86TZ1 520 aa16.1■□□□□ 0.17
SYP-203ENST00000466635 TEPSINQ96N21 525 aa16.1■□□□□ 0.17
SYP-203ENST00000466635 CSRNP1Q96S65 589 aa16.1■□□□□ 0.17
SYP-203ENST00000466635 SAP30BPQ9UHR5 308 aaKnown RBP16.1■□□□□ 0.17
SYP-203ENST00000466635 PASKQ96RG2 1323 aa16.1■□□□□ 0.17
SYP-203ENST00000466635 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
SYP-203ENST00000466635 GSG1L2A8MUP6 293 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 PPP1R12BO60237 982 aaPredicted RBP16.09■□□□□ 0.17
SYP-203ENST00000466635 TDO2P48775 406 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
SYP-203ENST00000466635 IFNL3Q8IZI9 196 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 C2orf69Q8N8R5 385 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 TRIM34Q9BYJ4 488 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 PI4KBQ9UBF8 816 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
SYP-203ENST00000466635 PALD1Q9ULE6 856 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 ATRNL1Q5VV63 1379 aa16.09■□□□□ 0.17
SYP-203ENST00000466635 COL2A1P02458 1487 aaPredicted RBP16.09■□□□□ 0.17
SYP-203ENST00000466635 FKBP1BP68106 108 aa16.08■□□□□ 0.16
SYP-203ENST00000466635 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.16
SYP-203ENST00000466635 TTLL12Q14166 644 aaPredicted RBP16.08■□□□□ 0.16
SYP-203ENST00000466635 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.16
SYP-203ENST00000466635 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
SYP-203ENST00000466635 ARMC9Q7Z3E5 817 aa16.08■□□□□ 0.16
SYP-203ENST00000466635 FOXP4Q8IVH2 680 aaPredicted RBP16.08■□□□□ 0.16
SYP-203ENST00000466635 NAPBQ9H115 298 aa16.08■□□□□ 0.16
SYP-203ENST00000466635 ARPP21Q9UBL0 812 aaPredicted RBP16.08■□□□□ 0.16
SYP-203ENST00000466635 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.16
SYP-203ENST00000466635 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SYP-203ENST00000466635 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SYP-203ENST00000466635 SGSM2O43147 1006 aa16.07■□□□□ 0.16
SYP-203ENST00000466635 HSPD1P10809 573 aaKnown RBP16.07■□□□□ 0.16
SYP-203ENST00000466635 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
SYP-203ENST00000466635 CRACR2BQ8N4Y2 399 aaPredicted RBP16.07■□□□□ 0.16
SYP-203ENST00000466635 ESYT1Q9BSJ8 1104 aa16.07■□□□□ 0.16
SYP-203ENST00000466635 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
SYP-203ENST00000466635 MYH7P12883 1935 aa16.07■□□□□ 0.16
SYP-203ENST00000466635 TMEM88BA6NKF7 163 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 TBC1D12O60347 775 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 IREB2P48200 963 aaKnown RBP16.06■□□□□ 0.16
SYP-203ENST00000466635 APLP1P51693 650 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 PRKG1Q13976 671 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 ALX1Q15699 326 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 SBK1Q52WX2 424 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 CST9Q5W186 159 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 CTR9Q6PD62 1173 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 ZNF341Q9BYN7 854 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.06■□□□□ 0.16
SYP-203ENST00000466635 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
SYP-203ENST00000466635 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
SYP-203ENST00000466635 TAOK2Q9UL54 1235 aa16.06■□□□□ 0.16
SYP-203ENST00000466635 SLC4A8Q2Y0W8 1093 aa16.05■□□□□ 0.16
SYP-203ENST00000466635 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
SYP-203ENST00000466635 EHD4Q9H223 541 aa16.05■□□□□ 0.16
SYP-203ENST00000466635 CTNNA3Q9UI47 895 aa16.05■□□□□ 0.16
SYP-203ENST00000466635 SERPINB13Q9UIV8 391 aa16.05■□□□□ 0.16
SYP-203ENST00000466635 ANGEL1Q9UNK9 670 aaKnown RBP16.05■□□□□ 0.16
SYP-203ENST00000466635 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
SYP-203ENST00000466635 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
SYP-203ENST00000466635 SLC3A2P08195 630 aaKnown RBP16.04■□□□□ 0.16
SYP-203ENST00000466635 PLCD1P51178 756 aa16.04■□□□□ 0.16
SYP-203ENST00000466635 MAP3K10Q02779 954 aa16.04■□□□□ 0.16
SYP-203ENST00000466635 C12orf60Q5U649 245 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms