RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 RHBDL3P58872 404 aa20.41■□□□□ 0.86
SDHB-203ENST00000466613 CRHR2Q13324 411 aa20.41■□□□□ 0.86
SDHB-203ENST00000466613 PPIL2Q13356 520 aa20.41■□□□□ 0.86
SDHB-203ENST00000466613 CCDC8Q9H0W5 538 aaPredicted RBP20.41■□□□□ 0.86
SDHB-203ENST00000466613 DDX4Q9NQI0 724 aaKnown RBP20.41■□□□□ 0.86
SDHB-203ENST00000466613 ZBTB40Q9NUA8 1239 aa20.41■□□□□ 0.86
SDHB-203ENST00000466613 TLR7Q9NYK1 1049 aaKnown RBP20.41■□□□□ 0.86
SDHB-203ENST00000466613 CDK5RAP2Q96SN8 1893 aa20.41■□□□□ 0.86
SDHB-203ENST00000466613 MAP4K4O95819 1239 aaPredicted RBP20.4■□□□□ 0.86
SDHB-203ENST00000466613 PPATQ06203 517 aa20.4■□□□□ 0.86
SDHB-203ENST00000466613 PICALMQ13492 652 aa20.4■□□□□ 0.86
SDHB-203ENST00000466613 PKN2Q16513 984 aaKnown RBP20.4■□□□□ 0.86
SDHB-203ENST00000466613 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
SDHB-203ENST00000466613 SH3BP5LQ7L8J4 393 aa20.4■□□□□ 0.86
SDHB-203ENST00000466613 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
SDHB-203ENST00000466613 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
SDHB-203ENST00000466613 DOCK1Q14185 1865 aa20.39■□□□□ 0.86
SDHB-203ENST00000466613 FOCADQ5VW36 1801 aa20.39■□□□□ 0.86
SDHB-203ENST00000466613 IRF6O14896 467 aa20.39■□□□□ 0.85
SDHB-203ENST00000466613 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
SDHB-203ENST00000466613 CYP2E1P05181 493 aaPredicted RBP20.39■□□□□ 0.85
SDHB-203ENST00000466613 NOL9Q5SY16 702 aaKnown RBP20.39■□□□□ 0.85
SDHB-203ENST00000466613 ZSCAN29Q8IWY8 852 aaPredicted RBP20.39■□□□□ 0.85
SDHB-203ENST00000466613 DDTLA6NHG4 134 aaPredicted RBP20.38■□□□□ 0.85
SDHB-203ENST00000466613 IGSF3O75054 1194 aa20.38■□□□□ 0.85
SDHB-203ENST00000466613 CETPP11597 493 aa20.38■□□□□ 0.85
SDHB-203ENST00000466613 SNAPC2Q13487 334 aa20.38■□□□□ 0.85
SDHB-203ENST00000466613 NAA16Q6N069 864 aaPredicted RBP20.38■□□□□ 0.85
SDHB-203ENST00000466613 COL2A1P02458 1487 aaPredicted RBP20.37■□□□□ 0.85
SDHB-203ENST00000466613 HMMRO75330 724 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 ZAP70P43403 619 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 MAP3K10Q02779 954 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 PDE3AQ14432 1141 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 AACSQ86V21 672 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 FAM43AQ8N2R8 423 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.37■□□□□ 0.85
SDHB-203ENST00000466613 RHPN1Q8TCX5 695 aa20.37■□□□□ 0.85
SDHB-203ENST00000466613 PHF20L1A8MW92 1017 aa20.36■□□□□ 0.85
SDHB-203ENST00000466613 TAF1CQ15572 869 aaPredicted RBP20.36■□□□□ 0.85
SDHB-203ENST00000466613 SIRT2Q8IXJ6 389 aa20.36■□□□□ 0.85
SDHB-203ENST00000466613 NOL10Q9BSC4 688 aaKnown RBP20.36■□□□□ 0.85
SDHB-203ENST00000466613 ZCCHC17Q9NP64 241 aaKnown RBP20.36■□□□□ 0.85
SDHB-203ENST00000466613 PHIPQ8WWQ0 1821 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 ATAD5Q96QE3 1844 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 BAG3O95817 575 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 TEX11Q8IYF3 940 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 OSBPL5Q9H0X9 879 aaPredicted RBP20.35■□□□□ 0.85
SDHB-203ENST00000466613 ZFYVE28Q9HCC9 887 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 PIH1D3Q9NQM4 214 aaKnown RBP20.35■□□□□ 0.85
SDHB-203ENST00000466613 AATFQ9NY61 560 aaKnown RBP eCLIP20.35■□□□□ 0.85
SDHB-203ENST00000466613 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 KCNH4Q9UQ05 1017 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 PTPRFP10586 1907 aa20.35■□□□□ 0.85
SDHB-203ENST00000466613 BTBD19C9JJ37 291 aa20.34■□□□□ 0.85
SDHB-203ENST00000466613 FBXO46Q6PJ61 603 aaPredicted RBP20.34■□□□□ 0.85
SDHB-203ENST00000466613 ADGRA1Q86SQ6 560 aa20.34■□□□□ 0.85
SDHB-203ENST00000466613 SCYL3Q8IZE3 742 aa20.34■□□□□ 0.85
SDHB-203ENST00000466613 SH3RF3Q8TEJ3 882 aaPredicted RBP20.34■□□□□ 0.85
SDHB-203ENST00000466613 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
SDHB-203ENST00000466613 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
SDHB-203ENST00000466613 SIPA1L1O43166 1804 aa20.34■□□□□ 0.85
SDHB-203ENST00000466613 TBC1D12O60347 775 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 SLURP2P0DP57 97 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 PLCG2P16885 1265 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 RGS19P49795 217 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 PPP4CP60510 307 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 SP3Q02447 781 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 CLASRPQ8N2M8 674 aaKnown RBP20.33■□□□□ 0.85
SDHB-203ENST00000466613 TRIM17Q9Y577 477 aa20.33■□□□□ 0.85
SDHB-203ENST00000466613 CTNND1O60716 968 aaKnown RBP20.32■□□□□ 0.84
SDHB-203ENST00000466613 OTOP1Q7RTM1 612 aa20.32■□□□□ 0.84
SDHB-203ENST00000466613 CD99L2Q8TCZ2 262 aa20.32■□□□□ 0.84
SDHB-203ENST00000466613 PICK1Q9NRD5 415 aa20.32■□□□□ 0.84
SDHB-203ENST00000466613 NDUFB9Q9Y6M9 179 aa20.32■□□□□ 0.84
SDHB-203ENST00000466613 APBB1O00213 710 aa20.31■□□□□ 0.84
SDHB-203ENST00000466613 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
SDHB-203ENST00000466613 HTTP42858 3142 aa20.31■□□□□ 0.84
SDHB-203ENST00000466613 CXCL11O14625 94 aa20.3■□□□□ 0.84
SDHB-203ENST00000466613 TLR2O60603 784 aa20.3■□□□□ 0.84
SDHB-203ENST00000466613 IDH1O75874 414 aaKnown RBP20.3■□□□□ 0.84
SDHB-203ENST00000466613 PTPRAP18433 802 aa20.3■□□□□ 0.84
SDHB-203ENST00000466613 ANKRD23Q86SG2 305 aa20.3■□□□□ 0.84
SDHB-203ENST00000466613 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
SDHB-203ENST00000466613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.3■□□□□ 0.84
SDHB-203ENST00000466613 ZHX2Q9Y6X8 837 aa20.3■□□□□ 0.84
SDHB-203ENST00000466613 MYH1P12882 1939 aa20.29■□□□□ 0.84
SDHB-203ENST00000466613 CYP7A1P22680 504 aa20.29■□□□□ 0.84
SDHB-203ENST00000466613 MOGSQ13724 837 aa20.29■□□□□ 0.84
SDHB-203ENST00000466613 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
SDHB-203ENST00000466613 DHX36Q9H2U1 1008 aaKnown RBP20.29■□□□□ 0.84
SDHB-203ENST00000466613 EFCC1Q9HA90 598 aa20.29■□□□□ 0.84
SDHB-203ENST00000466613 FLT1P17948 1338 aa20.28■□□□□ 0.84
SDHB-203ENST00000466613 ZSWIM8A7E2V4 1837 aa20.28■□□□□ 0.84
SDHB-203ENST00000466613 FAM196BA6NMK8 535 aa20.28■□□□□ 0.84
SDHB-203ENST00000466613 IFIT2P09913 472 aaKnown RBP20.28■□□□□ 0.84
SDHB-203ENST00000466613 MAP3K12Q12852 859 aa20.28■□□□□ 0.84
SDHB-203ENST00000466613 TMED8Q6PL24 325 aaPredicted RBP20.28■□□□□ 0.84
SDHB-203ENST00000466613 MAGEB6Q8N7X4 407 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms