RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
GPNMB-206ENST00000465673 PTPRAP18433 802 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 UBXN2AP68543 259 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 PRRT2Q7Z6L0 340 aaPredicted RBP12.87□□□□□ -0.35
GPNMB-206ENST00000465673 NKX2-3Q8TAU0 364 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
GPNMB-206ENST00000465673 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 AFG3L2Q9Y4W6 797 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 MYH13Q9UKX3 1938 aa12.87□□□□□ -0.35
GPNMB-206ENST00000465673 TRIM75PA6NK02 468 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
GPNMB-206ENST00000465673 SGPL1O95470 568 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 INHAP05111 366 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 PICALMQ13492 652 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 SLAIN1Q8ND83 568 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
GPNMB-206ENST00000465673 MGAMO43451 1857 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
GPNMB-206ENST00000465673 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
GPNMB-206ENST00000465673 TIMM10P62072 90 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 TREML2Q5T2D2 321 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 FASTKD5Q7L8L6 764 aaKnown RBP12.85□□□□□ -0.35
GPNMB-206ENST00000465673 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 IDI2Q9BXS1 227 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
GPNMB-206ENST00000465673 ABCF2Q9UG63 623 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 LRRFIP2Q9Y608 721 aaKnown RBP12.85□□□□□ -0.35
GPNMB-206ENST00000465673 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
GPNMB-206ENST00000465673 GAKO14976 1311 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
GPNMB-206ENST00000465673 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 TNPO2O14787 897 aaKnown RBP12.84□□□□□ -0.35
GPNMB-206ENST00000465673 ENTPD3O75355 529 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 CIAO1O76071 339 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 UBTFL1P0CB47 393 aaPredicted RBP12.84□□□□□ -0.35
GPNMB-206ENST00000465673 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 ANKRD13CQ8N6S4 541 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
GPNMB-206ENST00000465673 DIS3LQ8TF46 1054 aaKnown RBP12.84□□□□□ -0.35
GPNMB-206ENST00000465673 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 NR2E3Q9Y5X4 410 aa12.84□□□□□ -0.35
GPNMB-206ENST00000465673 BTDP43251 543 aa12.83□□□□□ -0.36
GPNMB-206ENST00000465673 SLFN5Q08AF3 891 aa12.83□□□□□ -0.36
GPNMB-206ENST00000465673 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
GPNMB-206ENST00000465673 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
GPNMB-206ENST00000465673 PAWRQ96IZ0 340 aaKnown RBP12.83□□□□□ -0.36
GPNMB-206ENST00000465673 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
GPNMB-206ENST00000465673 MYH2Q9UKX2 1941 aa12.83□□□□□ -0.36
GPNMB-206ENST00000465673 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
GPNMB-206ENST00000465673 E9PSI1 815 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 SEMA3EO15041 775 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 EVI5O60447 810 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 CTNND1O60716 968 aaKnown RBP12.82□□□□□ -0.36
GPNMB-206ENST00000465673 IL15P40933 162 aaPredicted RBP12.82□□□□□ -0.36
GPNMB-206ENST00000465673 RHBDL3P58872 404 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 TRIM32Q13049 653 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 RRP1BQ14684 758 aaKnown RBP12.82□□□□□ -0.36
GPNMB-206ENST00000465673 MEIS3Q99687 375 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
GPNMB-206ENST00000465673 AGTPBP1Q9UPW5 1226 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 DOCK3Q8IZD9 2030 aa12.82□□□□□ -0.36
GPNMB-206ENST00000465673 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 PEX10O60683 326 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 MECOMQ03112 1051 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 SPP2Q13103 211 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 IRF5Q13568 498 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
GPNMB-206ENST00000465673 CRISPLD2Q9H0B8 497 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 PAK6Q9NQU5 681 aaPredicted RBP12.81□□□□□ -0.36
GPNMB-206ENST00000465673 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 PTPRFP10586 1907 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 MROH7-TTC4A0A0A0MT08 1334 aa12.81□□□□□ -0.36
GPNMB-206ENST00000465673 A0A1B0GUL7 405 aa12.8□□□□□ -0.36
GPNMB-206ENST00000465673 TFCP2Q12800 502 aa12.8□□□□□ -0.36
GPNMB-206ENST00000465673 COA7Q96BR5 231 aa12.8□□□□□ -0.36
GPNMB-206ENST00000465673 XAGE2Q96GT9 111 aa12.8□□□□□ -0.36
GPNMB-206ENST00000465673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPNMB-206ENST00000465673 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
GPNMB-206ENST00000465673 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
GPNMB-206ENST00000465673 LAMA3Q16787 3333 aa12.8□□□□□ -0.36
GPNMB-206ENST00000465673 DOCK1Q14185 1865 aa12.79□□□□□ -0.36
GPNMB-206ENST00000465673 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
GPNMB-206ENST00000465673 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
GPNMB-206ENST00000465673 HMGCS2P54868 508 aa12.79□□□□□ -0.36
GPNMB-206ENST00000465673 ALDH1L2Q3SY69 923 aa12.79□□□□□ -0.36
GPNMB-206ENST00000465673 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
GPNMB-206ENST00000465673 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
GPNMB-206ENST00000465673 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms