RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 TTC14Q96N46 770 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 ARPP21Q9UBL0 812 aaPredicted RBP25.73■■□□□ 1.71
ITGA4-204ENST00000465522 ANAPC4Q9UJX5 808 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 ADAMTSL1Q8N6G6 1762 aa25.73■■□□□ 1.71
ITGA4-204ENST00000465522 DICER1Q9UPY3 1922 aaKnown RBP25.73■■□□□ 1.71
ITGA4-204ENST00000465522 MCM2P49736 904 aa25.72■■□□□ 1.71
ITGA4-204ENST00000465522 COL9A3Q14050 684 aaPredicted RBP25.72■■□□□ 1.71
ITGA4-204ENST00000465522 SBK1Q52WX2 424 aa25.72■■□□□ 1.71
ITGA4-204ENST00000465522 PCDHAC2Q9Y5I4 1007 aa25.72■■□□□ 1.71
ITGA4-204ENST00000465522 AKNAD1Q5T1N1 836 aa25.71■■□□□ 1.71
ITGA4-204ENST00000465522 MFSD6Q6ZSS7 791 aa25.71■■□□□ 1.71
ITGA4-204ENST00000465522 RALYLQ86SE5 291 aaKnown RBP25.71■■□□□ 1.71
ITGA4-204ENST00000465522 AMOTL1Q8IY63 956 aa25.71■■□□□ 1.71
ITGA4-204ENST00000465522 CYP2D7A0A087X1C5 515 aa25.71■■□□□ 1.71
ITGA4-204ENST00000465522 K7ELQ4 463 aaPredicted RBP25.71■■□□□ 1.71
ITGA4-204ENST00000465522 GPR162Q16538 588 aa25.71■■□□□ 1.71
ITGA4-204ENST00000465522 DHX32Q7L7V1 743 aaKnown RBP25.71■■□□□ 1.71
ITGA4-204ENST00000465522 GJA3Q9Y6H8 435 aa25.71■■□□□ 1.71
ITGA4-204ENST00000465522 RPS12P25398 132 aaKnown RBP25.7■■□□□ 1.7
ITGA4-204ENST00000465522 STK11IPQ8N1F8 1099 aa25.7■■□□□ 1.7
ITGA4-204ENST00000465522 STAG1Q8WVM7 1258 aa25.7■■□□□ 1.7
ITGA4-204ENST00000465522 RNF41Q9H4P4 317 aaPredicted RBP25.7■■□□□ 1.7
ITGA4-204ENST00000465522 FLT1P17948 1338 aa25.7■■□□□ 1.7
ITGA4-204ENST00000465522 AK2P54819 239 aa25.69■■□□□ 1.7
ITGA4-204ENST00000465522 PICALMQ13492 652 aa25.69■■□□□ 1.7
ITGA4-204ENST00000465522 DLGAP5Q15398 846 aa25.69■■□□□ 1.7
ITGA4-204ENST00000465522 TCEANC2Q96MN5 208 aa25.69■■□□□ 1.7
ITGA4-204ENST00000465522 CNNM2Q9H8M5 875 aa25.69■■□□□ 1.7
ITGA4-204ENST00000465522 INCENPQ9NQS7 918 aa25.69■■□□□ 1.7
ITGA4-204ENST00000465522 WDHD1O75717 1129 aaPredicted RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 POLR3DP05423 398 aaPredicted RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 MMP14P50281 582 aa25.68■■□□□ 1.7
ITGA4-204ENST00000465522 PRMT6Q96LA8 375 aaPredicted RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 SAP30BPQ9UHR5 308 aaKnown RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 FOCADQ5VW36 1801 aa25.68■■□□□ 1.7
ITGA4-204ENST00000465522 ECM29Q5VYK3 1845 aa25.68■■□□□ 1.7
ITGA4-204ENST00000465522 NAV1Q8NEY1 1877 aa25.68■■□□□ 1.7
ITGA4-204ENST00000465522 SLC3A2P08195 630 aaKnown RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 C12orf60Q5U649 245 aa25.68■■□□□ 1.7
ITGA4-204ENST00000465522 NOL8Q76FK4 1167 aaKnown RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 KRT23Q9C075 422 aa25.68■■□□□ 1.7
ITGA4-204ENST00000465522 ALDH8A1Q9H2A2 487 aaPredicted RBP25.68■■□□□ 1.7
ITGA4-204ENST00000465522 MYH1P12882 1939 aa25.67■■□□□ 1.7
ITGA4-204ENST00000465522 CYP2D6P10635 497 aa25.67■■□□□ 1.7
ITGA4-204ENST00000465522 MCM5P33992 734 aa25.67■■□□□ 1.7
ITGA4-204ENST00000465522 EXOSC10Q01780 885 aaKnown RBP25.67■■□□□ 1.7
ITGA4-204ENST00000465522 TDRD3Q9H7E2 651 aaKnown RBP25.67■■□□□ 1.7
ITGA4-204ENST00000465522 TOMM22Q9NS69 142 aa25.67■■□□□ 1.7
ITGA4-204ENST00000465522 RNF181Q9P0P0 153 aa25.67■■□□□ 1.7
ITGA4-204ENST00000465522 SPDYE2BA6NHP3 402 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 SMIM22K7EJ46 135 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 SPDYE6P0CI01 402 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 ANKRD1Q15327 319 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 SLC4A8Q2Y0W8 1093 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 MB21D2Q8IYB1 491 aaPredicted RBP25.66■■□□□ 1.7
ITGA4-204ENST00000465522 DPF2Q92785 391 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 TACC3Q9Y6A5 838 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 ZNF541Q9H0D2 1346 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 B4E1Z4 1266 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 GMPSP49915 693 aaPredicted RBP25.66■■□□□ 1.7
ITGA4-204ENST00000465522 FGD1P98174 961 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 CHST3Q7LGC8 479 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 MTMR14Q8NCE2 650 aa25.66■■□□□ 1.7
ITGA4-204ENST00000465522 DDX4Q9NQI0 724 aaKnown RBP25.66■■□□□ 1.7
ITGA4-204ENST00000465522 NEDD4P46934 1319 aa25.65■■□□□ 1.7
ITGA4-204ENST00000465522 TIAM2Q8IVF5 1701 aa25.65■■□□□ 1.7
ITGA4-204ENST00000465522 LAMB1P07942 1786 aa25.65■■□□□ 1.7
ITGA4-204ENST00000465522 PCP11498 1178 aaKnown RBP25.65■■□□□ 1.7
ITGA4-204ENST00000465522 RRP12Q5JTH9 1297 aaKnown RBP25.65■■□□□ 1.7
ITGA4-204ENST00000465522 Q6ZUG5 572 aa25.65■■□□□ 1.7
ITGA4-204ENST00000465522 LIMCH1Q9UPQ0 1083 aa25.65■■□□□ 1.7
ITGA4-204ENST00000465522 CACNB3P54284 484 aa25.64■■□□□ 1.7
ITGA4-204ENST00000465522 EVX2Q03828 476 aa25.64■■□□□ 1.7
ITGA4-204ENST00000465522 NFIAQ12857 509 aa25.64■■□□□ 1.7
ITGA4-204ENST00000465522 LARP6Q9BRS8 491 aaKnown RBP25.64■■□□□ 1.7
ITGA4-204ENST00000465522 IDI2Q9BXS1 227 aa25.64■■□□□ 1.7
ITGA4-204ENST00000465522 LRRC2Q9BYS8 371 aa25.64■■□□□ 1.7
ITGA4-204ENST00000465522 MYOZ2Q9NPC6 264 aa25.64■■□□□ 1.7
ITGA4-204ENST00000465522 PRC1O43663 620 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 GRIN3BO60391 1043 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 PLCD1P51178 756 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 PDE4BQ07343 736 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 TMX3Q96JJ7 454 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
ITGA4-204ENST00000465522 KDM4AO75164 1064 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 FGRP09769 529 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 TOB2Q14106 344 aaPredicted RBP25.63■■□□□ 1.69
ITGA4-204ENST00000465522 C9orf131Q5VYM1 1079 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 TTC6Q86TZ1 520 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 GPC2Q8N158 579 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 OSBPL5Q9H0X9 879 aaPredicted RBP25.63■■□□□ 1.69
ITGA4-204ENST00000465522 TMOD2Q9NZR1 351 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 ZSWIM5Q9P217 1185 aa25.63■■□□□ 1.69
ITGA4-204ENST00000465522 HSP90AA1P07900 732 aaKnown RBP25.62■■□□□ 1.69
ITGA4-204ENST00000465522 ZNF280AP59817 542 aaPredicted RBP25.62■■□□□ 1.69
ITGA4-204ENST00000465522 SPRYD3Q8NCJ5 442 aa25.62■■□□□ 1.69
ITGA4-204ENST00000465522 ESR2Q92731 530 aa25.62■■□□□ 1.69
ITGA4-204ENST00000465522 WDR19Q8NEZ3 1342 aa25.61■■□□□ 1.69
ITGA4-204ENST00000465522 SHTN1A0MZ66 631 aa25.61■■□□□ 1.69
ITGA4-204ENST00000465522 NPM3O75607 178 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms