RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 PPM1JQ5JR12 505 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.92□□□□□ -1.46
XRN1-205ENST00000465507 ZNF428Q96B54 188 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 CRELD1Q96HD1 420 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 C7orf69Q9H7B7 122 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 FAM95CA0A1B0GW59 222 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 TIAF1O95411 115 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 CDK8P49336 464 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 PTPN11Q06124 597 aaPredicted RBP5.91□□□□□ -1.46
XRN1-205ENST00000465507 FANCD2OSQ96PS1 177 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 YIPF2Q9BWQ6 316 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 SUGCTQ9HAC7 445 aa5.91□□□□□ -1.46
XRN1-205ENST00000465507 SSTR4P31391 388 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 INPP5AQ14642 412 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 UVSSAQ2YD98 709 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 PAOXQ6QHF9 649 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 RELL1Q8IUW5 271 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 SHISA5Q8N114 240 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 RGS22Q8NE09 1264 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
XRN1-205ENST00000465507 TBC1D32Q96NH3 1257 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 MIR1-1HGQ9H1L0 117 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 PCMTD2Q9NV79 361 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 CYP8B1Q9UNU6 501 aa5.9□□□□□ -1.46
XRN1-205ENST00000465507 WDR64B1ANS9 1081 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 TFE3P19532 575 aaPredicted RBP5.89□□□□□ -1.47
XRN1-205ENST00000465507 ITGAEP38570 1179 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 RBM25P49756 843 aaKnown RBP5.89□□□□□ -1.47
XRN1-205ENST00000465507 ZNF252P-AS1Q0IIN9 211 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 KIF4BQ2VIQ3 1234 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 WIPI1Q5MNZ9 446 aaPredicted RBP5.89□□□□□ -1.47
XRN1-205ENST00000465507 ATXN3LQ9H3M9 355 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 COPRSQ9NQ92 184 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 KRT82Q9NSB4 513 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 CRIM1Q9NZV1 1036 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 GGT7Q9UJ14 662 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 HIF3AQ9Y2N7 669 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 USP31Q70CQ4 1352 aa5.89□□□□□ -1.47
XRN1-205ENST00000465507 TLR3O15455 904 aaKnown RBP5.88□□□□□ -1.47
XRN1-205ENST00000465507 DYNC1LI2O43237 492 aaPredicted RBP5.88□□□□□ -1.47
XRN1-205ENST00000465507 TRIM37O94972 964 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 PF4P02776 101 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 CDK5R2Q13319 367 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 SNAP47Q5SQN1 464 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 LRFN4Q6PJG9 635 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 CLEC10AQ8IUN9 316 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 SMYD4Q8IYR2 804 aaPredicted RBP5.88□□□□□ -1.47
XRN1-205ENST00000465507 SHKBP1Q8TBC3 707 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 PLPPR2Q96GM1 343 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 FAM83CQ9BQN1 747 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 BACH2Q9BYV9 841 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 SEMA6CQ9H3T2 930 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 LRRC4CQ9HCJ2 640 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 KBTBD4Q9NVX7 518 aa5.88□□□□□ -1.47
XRN1-205ENST00000465507 IGLV1-40P01703 118 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 CD97P48960 835 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
XRN1-205ENST00000465507 NFIAQ12857 509 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 MRPL58Q14197 206 aaKnown RBP5.87□□□□□ -1.47
XRN1-205ENST00000465507 MAP7Q14244 749 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 C9orf131Q5VYM1 1079 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 BNC2Q6ZN30 1099 aaPredicted RBP5.87□□□□□ -1.47
XRN1-205ENST00000465507 CDC37L1Q7L3B6 337 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
XRN1-205ENST00000465507 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 ISL2Q96A47 359 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 DISC1Q9NRI5 854 aa5.87□□□□□ -1.47
XRN1-205ENST00000465507 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.86□□□□□ -1.47
XRN1-205ENST00000465507 RBM47A0AV96 593 aaKnown RBP5.86□□□□□ -1.47
XRN1-205ENST00000465507 UNCXA6NJT0 531 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 FAM170BA6NMN3 283 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 BPNT1O95861 308 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 TGFB1P01137 390 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 NEFMP07197 916 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 ADMP35318 185 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 ST13P50502 369 aaKnown RBP5.86□□□□□ -1.47
XRN1-205ENST00000465507 AGMOQ6ZNB7 445 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 HS2ST1Q7LGA3 356 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 HDXQ7Z353 690 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 UBE3DQ7Z6J8 389 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 GOLM1Q8NBJ4 401 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 PHC3Q8NDX5 983 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 GAL3ST3Q96A11 431 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 OSBPL1AQ9BXW6 950 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 ATG3Q9NT62 314 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 PCDHGB7Q9Y5F8 929 aa5.86□□□□□ -1.47
XRN1-205ENST00000465507 GRIN3BO60391 1043 aa5.85□□□□□ -1.47
XRN1-205ENST00000465507 MED26O95402 600 aa5.85□□□□□ -1.47
XRN1-205ENST00000465507 CAMK2GQ13555 558 aaPredicted RBP5.85□□□□□ -1.47
XRN1-205ENST00000465507 ZC3H12AQ5D1E8 599 aaKnown RBP5.85□□□□□ -1.47
XRN1-205ENST00000465507 RNF43Q68DV7 783 aa5.85□□□□□ -1.47
XRN1-205ENST00000465507 MCTP1Q6DN14 999 aa5.85□□□□□ -1.47
XRN1-205ENST00000465507 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
XRN1-205ENST00000465507 ACSS3Q9H6R3 686 aa5.85□□□□□ -1.47
XRN1-205ENST00000465507 PRKAG2Q9UGJ0 569 aa5.85□□□□□ -1.47
XRN1-205ENST00000465507 PCDHGC5Q9Y5F6 944 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms