RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TEX11Q8IYF3 940 aa14.89□□□□□ -0.03
XRN1-204ENST00000465074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
XRN1-204ENST00000465074 FAM163AQ96GL9 167 aaPredicted RBP14.89□□□□□ -0.03
XRN1-204ENST00000465074 DOCK2Q92608 1830 aa14.89□□□□□ -0.03
XRN1-204ENST00000465074 RAB11FIP3O75154 756 aa14.88□□□□□ -0.03
XRN1-204ENST00000465074 ENTPD3O75355 529 aa14.88□□□□□ -0.03
XRN1-204ENST00000465074 WDHD1O75717 1129 aaPredicted RBP14.88□□□□□ -0.03
XRN1-204ENST00000465074 INPP5BP32019 993 aa14.88□□□□□ -0.03
XRN1-204ENST00000465074 INHBEP58166 350 aa14.88□□□□□ -0.03
XRN1-204ENST00000465074 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
XRN1-204ENST00000465074 SH3RF3Q8TEJ3 882 aaPredicted RBP14.88□□□□□ -0.03
XRN1-204ENST00000465074 ZNF512BQ96KM6 892 aaPredicted RBP14.88□□□□□ -0.03
XRN1-204ENST00000465074 DDX4Q9NQI0 724 aaKnown RBP14.88□□□□□ -0.03
XRN1-204ENST00000465074 AATFQ9NY61 560 aaKnown RBP eCLIP14.88□□□□□ -0.03
XRN1-204ENST00000465074 RPAP1Q9BWH6 1393 aaPredicted RBP14.87□□□□□ -0.03
XRN1-204ENST00000465074 SMARCA5O60264 1052 aaPredicted RBP14.87□□□□□ -0.03
XRN1-204ENST00000465074 BAG3O95817 575 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 CYP7A1P22680 504 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 RRP1P56182 461 aaKnown RBP14.87□□□□□ -0.03
XRN1-204ENST00000465074 RHBDL3P58872 404 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 OTUD7BQ6GQQ9 843 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
XRN1-204ENST00000465074 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 SNCAIPQ9Y6H5 919 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 MAST2Q6P0Q8 1798 aa14.87□□□□□ -0.03
XRN1-204ENST00000465074 CCL15-CCL14A0A0B4J2E2 113 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
XRN1-204ENST00000465074 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
XRN1-204ENST00000465074 SLURP2P0DP57 97 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 CCL15Q16663 113 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 ADGRA1Q86SQ6 560 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 ERO1BQ86YB8 467 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
XRN1-204ENST00000465074 FAM196BA6NMK8 535 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 ALDH1A1P00352 501 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 GTF2A2P52657 109 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
XRN1-204ENST00000465074 MAGEB6Q8N7X4 407 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 MIGA1Q8NAN2 632 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 ZNF296Q8WUU4 475 aaPredicted RBP14.85□□□□□ -0.03
XRN1-204ENST00000465074 ABHD8Q96I13 439 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 LRRCC1Q9C099 1032 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 MCOLN1Q9GZU1 580 aa14.85□□□□□ -0.03
XRN1-204ENST00000465074 SPDYE5A6NIY4 337 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 CCDC85CA6NKD9 419 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 GPR25O00155 361 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 GOLIM4O00461 696 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 PLCG2P16885 1265 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 MAP3K12Q12852 859 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 SLC4A8Q2Y0W8 1093 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 MAPKAPK5Q8IW41 473 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 PTPN18Q99952 460 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.84□□□□□ -0.03
XRN1-204ENST00000465074 PICK1Q9NRD5 415 aa14.84□□□□□ -0.03
XRN1-204ENST00000465074 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
XRN1-204ENST00000465074 IRF6O14896 467 aa14.83□□□□□ -0.04
XRN1-204ENST00000465074 SNAPC2Q13487 334 aa14.83□□□□□ -0.04
XRN1-204ENST00000465074 BRI3BPQ8WY22 251 aa14.83□□□□□ -0.04
XRN1-204ENST00000465074 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
XRN1-204ENST00000465074 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.04
XRN1-204ENST00000465074 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
XRN1-204ENST00000465074 CDK5RAP2Q96SN8 1893 aa14.82□□□□□ -0.04
XRN1-204ENST00000465074 FKTNO75072 461 aa14.82□□□□□ -0.04
XRN1-204ENST00000465074 MAP4K4O95819 1239 aaPredicted RBP14.82□□□□□ -0.04
XRN1-204ENST00000465074 CETPP11597 493 aa14.82□□□□□ -0.04
XRN1-204ENST00000465074 CRHR2Q13324 411 aa14.82□□□□□ -0.04
XRN1-204ENST00000465074 PPIL2Q13356 520 aa14.82□□□□□ -0.04
XRN1-204ENST00000465074 TTF1Q15361 905 aaPredicted RBP14.82□□□□□ -0.04
XRN1-204ENST00000465074 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
XRN1-204ENST00000465074 OSBPL5Q9H0X9 879 aaPredicted RBP14.82□□□□□ -0.04
XRN1-204ENST00000465074 RFX7Q2KHR2 1363 aa14.82□□□□□ -0.04
XRN1-204ENST00000465074 LAMB1P07942 1786 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 PHF20L1A8MW92 1017 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 USP5P45974 858 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 PPP4CP60510 307 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 PPATQ06203 517 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 TAF1CQ15572 869 aaPredicted RBP14.81□□□□□ -0.04
XRN1-204ENST00000465074 SLC9C2Q5TAH2 1124 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
XRN1-204ENST00000465074 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 PALD1Q9ULE6 856 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 PCDHB15Q9Y5E8 787 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 ZHX2Q9Y6X8 837 aa14.81□□□□□ -0.04
XRN1-204ENST00000465074 TESPA1A2RU30 521 aaPredicted RBP14.8□□□□□ -0.04
XRN1-204ENST00000465074 ECM2O94769 699 aaPredicted RBP14.8□□□□□ -0.04
XRN1-204ENST00000465074 CTU1Q7Z7A3 348 aaKnown RBP14.8□□□□□ -0.04
XRN1-204ENST00000465074 CCDC84Q86UT8 332 aaPredicted RBP14.8□□□□□ -0.04
XRN1-204ENST00000465074 SCYL3Q8IZE3 742 aa14.8□□□□□ -0.04
XRN1-204ENST00000465074 FAM43AQ8N2R8 423 aa14.8□□□□□ -0.04
XRN1-204ENST00000465074 PAG1Q9NWQ8 432 aa14.8□□□□□ -0.04
XRN1-204ENST00000465074 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.8□□□□□ -0.04
XRN1-204ENST00000465074 MAGEB6P1A0A0J9YX57 407 aa14.79□□□□□ -0.04
XRN1-204ENST00000465074 BTBD19C9JJ37 291 aa14.79□□□□□ -0.04
XRN1-204ENST00000465074 CTNND1O60716 968 aaKnown RBP14.79□□□□□ -0.04
XRN1-204ENST00000465074 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
XRN1-204ENST00000465074 MYH1P12882 1939 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms