RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 CEP44Q9C0F1 390 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 LRRC4CQ9HCJ2 640 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 C1GALT1Q9NS00 363 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 ADGRE2Q9UHX3 823 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 PPP1R9AQ9ULJ8 1098 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 PPM1HQ9ULR3 514 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 NESP48681 1621 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 SYNJ1O43426 1573 aa5.83□□□□□ -1.48
SCN3A-206ENST00000465043 LIG1P18858 919 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 NME2P22392 152 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 ARNTP27540 789 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 KCNA1Q09470 495 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
SCN3A-206ENST00000465043 ALG1LQ6GMV1 187 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 SULF2Q8IWU5 870 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 TP53INP2Q8IXH6 220 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 SMYD4Q8IYR2 804 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-206ENST00000465043 FANCD2OSQ96PS1 177 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 AKAP2Q9Y2D5 859 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 SOGA1O94964 1423 aa5.82□□□□□ -1.48
SCN3A-206ENST00000465043 RUSC2Q8N2Y8 1516 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 ZNF862O60290 1169 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 ZNF157P51786 506 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-206ENST00000465043 ATP2B2Q01814 1243 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 PDZD3Q86UT5 571 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 ABI1Q8IZP0 508 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 FLCNQ8NFG4 579 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 ANKRD24Q8TF21 1146 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 KCNB2Q92953 911 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 PCOLCE2Q9UKZ9 415 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 SLC5A6Q9Y289 635 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 RNF114Q9Y508 228 aa5.81□□□□□ -1.48
SCN3A-206ENST00000465043 ERVK-24P63145 666 aa5.8□□□□□ -1.48
SCN3A-206ENST00000465043 NXPE4Q6UWF7 544 aa5.8□□□□□ -1.48
SCN3A-206ENST00000465043 SHISA5Q8N114 240 aa5.8□□□□□ -1.48
SCN3A-206ENST00000465043 WDR89Q96FK6 387 aaPredicted RBP5.8□□□□□ -1.48
SCN3A-206ENST00000465043 ZC3H12CQ9C0D7 883 aaKnown RBP5.8□□□□□ -1.48
SCN3A-206ENST00000465043 MKNK2Q9HBH9 465 aa5.8□□□□□ -1.48
SCN3A-206ENST00000465043 DISC1Q9NRI5 854 aa5.8□□□□□ -1.48
SCN3A-206ENST00000465043 ZC3H7BQ9UGR2 993 aaKnown RBP5.8□□□□□ -1.48
SCN3A-206ENST00000465043 PCDHGC5Q9Y5F6 944 aa5.8□□□□□ -1.48
SCN3A-206ENST00000465043 DYNC1LI2O43237 492 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-206ENST00000465043 JUNBP17275 347 aaPredicted RBP5.79□□□□□ -1.48
SCN3A-206ENST00000465043 FMR1Q06787 632 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCN3A-206ENST00000465043 LRRC14Q15048 493 aa5.79□□□□□ -1.48
SCN3A-206ENST00000465043 ZC3H12AQ5D1E8 599 aaKnown RBP5.79□□□□□ -1.48
SCN3A-206ENST00000465043 FRMD6Q96NE9 622 aa5.79□□□□□ -1.48
SCN3A-206ENST00000465043 ASB16Q96NS5 453 aa5.79□□□□□ -1.48
SCN3A-206ENST00000465043 SSU72Q9NP77 194 aaKnown RBP5.79□□□□□ -1.48
SCN3A-206ENST00000465043 SPG7Q9UQ90 795 aa5.79□□□□□ -1.48
SCN3A-206ENST00000465043 CUX1P39880 1505 aa5.79□□□□□ -1.48
SCN3A-206ENST00000465043 RNGTTO60942 597 aaKnown RBP5.78□□□□□ -1.48
SCN3A-206ENST00000465043 TRIM37O94972 964 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 FAM87AP0C7U9 286 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 YBX3P16989 372 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN3A-206ENST00000465043 FGD1P98174 961 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 TTLL4Q14679 1199 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 PI16Q6UXB8 463 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 CBLL1Q75N03 491 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 RNF214Q8ND24 703 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 C3orf58Q8NDZ4 430 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 NETO1Q8TDF5 533 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 ASIC4Q96FT7 647 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 ACSBG1Q96GR2 724 aa5.78□□□□□ -1.48
SCN3A-206ENST00000465043 NECAB3Q96P71 396 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-206ENST00000465043 PAK6Q9NQU5 681 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-206ENST00000465043 FANCD2Q9BXW9 1451 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 MAPK8P45983 427 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 ZNF252P-AS1Q0IIN9 211 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 CDK5R2Q13319 367 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 MAP1SQ66K74 1059 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-206ENST00000465043 ARHGAP27Q6ZUM4 889 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCN3A-206ENST00000465043 BCL7CQ8WUZ0 217 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-206ENST00000465043 LGR6Q9HBX8 967 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 CBX8Q9HC52 389 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 CACNA2D2Q9NY47 1150 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 TOP2BQ02880 1626 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 PRDM2Q13029 1718 aa5.77□□□□□ -1.49
SCN3A-206ENST00000465043 BIN1O00499 593 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 HCLS1P14317 486 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-206ENST00000465043 NFXL1Q6ZNB6 911 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 KCT2Q8NC54 265 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 PICK1Q9NRD5 415 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 VAV3Q9UKW4 847 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 TIMELESSQ9UNS1 1208 aa5.76□□□□□ -1.49
SCN3A-206ENST00000465043 BIVM-ERCC5R4GMW8 1640 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 TMEM265A0A087WTH1 108 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 FANCGO15287 622 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 ITGB5P18084 799 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 PRKCQQ04759 706 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 IFI16Q16666 785 aaKnown RBP5.75□□□□□ -1.49
SCN3A-206ENST00000465043 LLGL2Q6P1M3 1020 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 TPTE2Q6XPS3 522 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 GPBAR1Q8TDU6 330 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 ISL2Q96A47 359 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 DUSP23Q9BVJ7 150 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 FAM8A1Q9UBU6 413 aa5.75□□□□□ -1.49
SCN3A-206ENST00000465043 GTF2IRD1Q9UHL9 959 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms