RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CDKL5O76039 1030 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 FOSBP53539 338 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 SART3Q15020 963 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 RRP12Q5JTH9 1297 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 RAB11FIP4Q86YS3 637 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 FLAD1Q8NFF5 587 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 CRNKL1Q9BZJ0 848 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 RBSNQ9H1K0 784 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 CFAP45Q9UL16 551 aa25.4■■□□□ 1.66
PDLIM2-216ENST00000464275 LETM1O95202 739 aaPredicted RBP25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 CPLX2Q6PUV4 134 aaKnown RBP25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 TMC4Q7Z404 712 aa25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 SLC51AQ86UW1 340 aa25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 TFIP11Q9UBB9 837 aaKnown RBP25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 GGA1Q9UJY5 639 aa25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 MYH6P13533 1939 aa25.39■■□□□ 1.66
PDLIM2-216ENST00000464275 CCDC69A6NI79 296 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 RXRBP28702 533 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 COL23A1Q86Y22 540 aaPredicted RBP25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 DZIP1Q86YF9 867 aaKnown RBP25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 LEO1Q8WVC0 666 aaPredicted RBP25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 SENP2Q9HC62 589 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 PODXL2Q9NZ53 605 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 UFL1O94874 794 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 PCP11498 1178 aaKnown RBP25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 ATL3Q6DD88 541 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 TMTC2Q8N394 836 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 NID2Q14112 1375 aa25.38■■□□□ 1.65
PDLIM2-216ENST00000464275 ERICH2A1L162 156 aa25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 SYNE3Q6ZMZ3 975 aa25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 C8orf76Q96K31 380 aa25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 ATP8A2Q9NTI2 1148 aa25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 SLC12A7Q9Y666 1083 aa25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 CDK5RAP2Q96SN8 1893 aa25.37■■□□□ 1.65
PDLIM2-216ENST00000464275 PPFIA3O75145 1194 aa25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 LDHBP07195 334 aaKnown RBP25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 WTAPQ15007 396 aa25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 ESR2Q92731 530 aa25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 GOLGA8AA7E2F4 631 aa25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 MICU3Q86XE3 530 aa25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 JAG2Q9Y219 1238 aa25.36■■□□□ 1.65
PDLIM2-216ENST00000464275 EP400Q96L91 3159 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 ADD1P35611 737 aaKnown RBP25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 GSTO1P78417 241 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 CTR9Q6PD62 1173 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 NAV1Q8NEY1 1877 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 ZNF396Q96N95 335 aaPredicted RBP25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 CDC27P30260 824 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 GUCY1B3Q02153 619 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 TPRNQ4KMQ1 711 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 STK11IPQ8N1F8 1099 aa25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 GPR101Q96P66 508 aaPredicted RBP25.35■■□□□ 1.65
PDLIM2-216ENST00000464275 FGRP09769 529 aa25.34■■□□□ 1.65
PDLIM2-216ENST00000464275 FBXO18Q8NFZ0 1043 aa25.34■■□□□ 1.65
PDLIM2-216ENST00000464275 CD209Q9NNX6 404 aa25.34■■□□□ 1.65
PDLIM2-216ENST00000464275 GOLGA6L4A6NEF3 574 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 IL1R1P14778 569 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 RXRAP19793 462 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 RCAN1P53805 252 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 SP8Q8IXZ3 490 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 UBAC1Q9BSL1 405 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 TSPY26PQ9H489 355 aa25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 DCP1AQ9NPI6 582 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 COL11A2P13942 1736 aaPredicted RBP25.33■■□□□ 1.65
PDLIM2-216ENST00000464275 MSNP26038 577 aaKnown RBP25.33■■□□□ 1.64
PDLIM2-216ENST00000464275 NTRK3Q16288 839 aa25.33■■□□□ 1.64
PDLIM2-216ENST00000464275 ZKSCAN3Q9BRR0 538 aa25.33■■□□□ 1.64
PDLIM2-216ENST00000464275 FAM217BQ9NTX9 383 aaPredicted RBP25.33■■□□□ 1.64
PDLIM2-216ENST00000464275 USP17L12C9JPN9 530 aa25.32■■□□□ 1.64
PDLIM2-216ENST00000464275 USP17L21D6R901 530 aa25.32■■□□□ 1.64
PDLIM2-216ENST00000464275 PPEF1O14829 653 aaPredicted RBP25.32■■□□□ 1.64
PDLIM2-216ENST00000464275 SBK1Q52WX2 424 aa25.32■■□□□ 1.64
PDLIM2-216ENST00000464275 TBC1D16Q8TBP0 767 aa25.32■■□□□ 1.64
PDLIM2-216ENST00000464275 ARPP21Q9UBL0 812 aaPredicted RBP25.32■■□□□ 1.64
PDLIM2-216ENST00000464275 CYP2D7A0A087X1C5 515 aa25.31■■□□□ 1.64
PDLIM2-216ENST00000464275 LDHCP07864 332 aa25.31■■□□□ 1.64
PDLIM2-216ENST00000464275 STK36Q9NRP7 1315 aa25.31■■□□□ 1.64
PDLIM2-216ENST00000464275 IARSP41252 1262 aaKnown RBP25.31■■□□□ 1.64
PDLIM2-216ENST00000464275 MYL10Q9BUA6 226 aa25.31■■□□□ 1.64
PDLIM2-216ENST00000464275 RCOR1Q9UKL0 485 aa25.31■■□□□ 1.64
PDLIM2-216ENST00000464275 SLC3A2P08195 630 aaKnown RBP25.3■■□□□ 1.64
PDLIM2-216ENST00000464275 SEC23AQ15436 765 aa25.3■■□□□ 1.64
PDLIM2-216ENST00000464275 CCDC144CPQ8IYA2 1237 aa25.3■■□□□ 1.64
PDLIM2-216ENST00000464275 NAP1L5Q96NT1 182 aaPredicted RBP25.3■■□□□ 1.64
PDLIM2-216ENST00000464275 POLLQ9UGP5 575 aa25.3■■□□□ 1.64
PDLIM2-216ENST00000464275 NPR1P16066 1061 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 BRAPQ7Z569 592 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 ILDR1Q86SU0 546 aaPredicted RBP25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 ALG1Q9BT22 464 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 NOL7Q9UMY1 257 aaKnown RBP25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 ATP6V0A2Q9Y487 856 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 PARP3Q9Y6F1 533 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 TNKSO95271 1327 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 ORC4O43929 436 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 BAG3O95817 575 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 UVSSAQ2YD98 709 aa25.29■■□□□ 1.64
PDLIM2-216ENST00000464275 OTUD7BQ6GQQ9 843 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms