RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 RANBP6O60518 1105 aaKnown RBP11.88□□□□□ -0.51
MSH5-211ENST00000463144 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
MSH5-211ENST00000463144 PHKBQ93100 1093 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 RNF41Q9H4P4 317 aaPredicted RBP11.88□□□□□ -0.51
MSH5-211ENST00000463144 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
MSH5-211ENST00000463144 XDHP47989 1333 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 MYH2Q9UKX2 1941 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 GOLGA8AA7E2F4 631 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 KIF28PB7ZC32 967 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 ST5P78524 1137 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 SLC12A7Q9Y666 1083 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 NID2Q14112 1375 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
MSH5-211ENST00000463144 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 CCDC69A6NI79 296 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 SEC23AQ15436 765 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 GRIK5Q16478 980 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 ATL3Q6DD88 541 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 C15orf52Q6ZUT6 534 aaKnown RBP11.86□□□□□ -0.51
MSH5-211ENST00000463144 PDLIM2Q96JY6 352 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
MSH5-211ENST00000463144 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 RRAGDQ9NQL2 400 aaPredicted RBP11.86□□□□□ -0.51
MSH5-211ENST00000463144 DACT1Q9NYF0 836 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 USP17L12C9JPN9 530 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 USP17L21D6R901 530 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 NR1I2O75469 434 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 POLR3DP05423 398 aaPredicted RBP11.86□□□□□ -0.51
MSH5-211ENST00000463144 FGRP09769 529 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 HOXA10P31260 410 aaPredicted RBP11.86□□□□□ -0.51
MSH5-211ENST00000463144 WTAPQ15007 396 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 FAM43AQ8N2R8 423 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
MSH5-211ENST00000463144 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
MSH5-211ENST00000463144 KLRG2A4D1S0 409 aaPredicted RBP11.85□□□□□ -0.51
MSH5-211ENST00000463144 CAMK4Q16566 473 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
MSH5-211ENST00000463144 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 CDKL5O76039 1030 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 IARSP41252 1262 aaKnown RBP11.85□□□□□ -0.51
MSH5-211ENST00000463144 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
MSH5-211ENST00000463144 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 BICD2Q8TD16 824 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 ESR2Q92731 530 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 CLIC4Q9Y696 253 aa11.85□□□□□ -0.51
MSH5-211ENST00000463144 LAMB1P07942 1786 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 PRDM1O75626 825 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 CYP2D6P10635 497 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 IFNAR1P17181 557 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 KRT40Q6A162 431 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 COL23A1Q86Y22 540 aaPredicted RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 WDR66Q8TBY9 1149 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 CRNKL1Q9BZJ0 848 aaKnown RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 GOLPH3LQ9H4A5 285 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
MSH5-211ENST00000463144 TNKSO95271 1327 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 BBOX1O75936 387 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 UFL1O94874 794 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 FMNL1O95466 1100 aaPredicted RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 ATP2B4P23634 1241 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 GUCY1A2P33402 732 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 MYSM1Q5VVJ2 828 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 SYNE3Q6ZMZ3 975 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 BRAPQ7Z569 592 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 DZIP1Q86YF9 867 aaKnown RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 TMTC2Q8N394 836 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
MSH5-211ENST00000463144 CRAMP1Q96RY5 1269 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 CLSTN2Q9H4D0 955 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 CD209Q9NNX6 404 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 ATP8A2Q9NTI2 1148 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 POLLQ9UGP5 575 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
MSH5-211ENST00000463144 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 ERICH2A1L162 156 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 PLSCR1O15162 318 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 MAP3K11Q16584 847 aa11.83□□□□□ -0.52
MSH5-211ENST00000463144 TMED8Q6PL24 325 aaPredicted RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
MSH5-211ENST00000463144 LINC00301Q8NCQ3 95 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms