RNA–Protein interactions for RNA: ENST00000461689.5

NEK4-203, Transcript of NIMA related kinase 4, humanhuman

TSL 5

Gene NEK4, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-203ENST00000461689 USP28Q96RU2 1077 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 UBAC1Q9BSL1 405 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 NUP62CLQ9H1M0 184 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
NEK4-203ENST00000461689 DDX19AQ9NUU7 478 aaKnown RBP15.73■□□□□ 0.11
NEK4-203ENST00000461689 BBOX1O75936 387 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 NTRK3Q16288 839 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 UVSSAQ2YD98 709 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 C15orf52Q6ZUT6 534 aaKnown RBP15.73■□□□□ 0.11
NEK4-203ENST00000461689 BRAPQ7Z569 592 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 CCDC144CPQ8IYA2 1237 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 PROM2Q8N271 834 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 ZKSCAN3Q9BRR0 538 aa15.73■□□□□ 0.11
NEK4-203ENST00000461689 CRNKL1Q9BZJ0 848 aaKnown RBP15.73■□□□□ 0.11
NEK4-203ENST00000461689 FAM217BQ9NTX9 383 aaPredicted RBP15.73■□□□□ 0.11
NEK4-203ENST00000461689 ZNF804AQ7Z570 1209 aa15.72■□□□□ 0.11
NEK4-203ENST00000461689 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
NEK4-203ENST00000461689 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
NEK4-203ENST00000461689 MYL10Q9BUA6 226 aa15.72■□□□□ 0.11
NEK4-203ENST00000461689 ATP8A2Q9NTI2 1148 aa15.72■□□□□ 0.11
NEK4-203ENST00000461689 AATFQ9NY61 560 aaKnown RBP eCLIP15.72■□□□□ 0.11
NEK4-203ENST00000461689 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
NEK4-203ENST00000461689 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 DZIP1Q86YF9 867 aaKnown RBP15.71■□□□□ 0.11
NEK4-203ENST00000461689 PHKBQ93100 1093 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 FUCA2Q9BTY2 467 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 RTEL1Q9NZ71 1219 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 USP17L12C9JPN9 530 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 USP17L21D6R901 530 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
NEK4-203ENST00000461689 CCDC192P0DO97 292 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 RCAN1P53805 252 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 SSRP1Q08945 709 aaKnown RBP15.71■□□□□ 0.11
NEK4-203ENST00000461689 FTOQ9C0B1 505 aaKnown RBP eCLIP15.71■□□□□ 0.11
NEK4-203ENST00000461689 TNMDQ9H2S6 317 aa15.71■□□□□ 0.11
NEK4-203ENST00000461689 LDHBP07195 334 aaKnown RBP15.7■□□□□ 0.1
NEK4-203ENST00000461689 FGRP09769 529 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
NEK4-203ENST00000461689 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
NEK4-203ENST00000461689 GPSM2P81274 684 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 CAMK4Q16566 473 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 PDLIM2Q96JY6 352 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 GJB4Q9NTQ9 266 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 MYH15Q9Y2K3 1946 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 POLRMTO00411 1230 aaKnown RBP15.7■□□□□ 0.1
NEK4-203ENST00000461689 NR1I2O75469 434 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 IFNAR1P17181 557 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 RTN1Q16799 776 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 WASF1Q92558 559 aa15.7■□□□□ 0.1
NEK4-203ENST00000461689 DCP1AQ9NPI6 582 aaPredicted RBP15.7■□□□□ 0.1
NEK4-203ENST00000461689 NID2Q14112 1375 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 STK36Q9NRP7 1315 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 DDR1Q08345 913 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 TRIM29Q14134 588 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 CLSTN2Q9H4D0 955 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 CYP2D7A0A087X1C5 515 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 KLRG2A4D1S0 409 aaPredicted RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 PLSCR1O15162 318 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 FMNL1O95466 1100 aaPredicted RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 ME1P48163 572 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 GSTO1P78417 241 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 SEC23AQ15436 765 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 KRT40Q6A162 431 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 IQCA1Q86XH1 822 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 CCAR1Q8IX12 1150 aaKnown RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 TRIM22Q8IYM9 498 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 FANCBQ8NB91 859 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 AIFM3Q96NN9 605 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 CRAMP1Q96RY5 1269 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 ZSCAN10Q96SZ4 725 aaPredicted RBP15.69■□□□□ 0.1
NEK4-203ENST00000461689 SLC26A6Q9BXS9 759 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 POLR3EQ9NVU0 708 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
NEK4-203ENST00000461689 BAZ2AQ9UIF9 1905 aaKnown RBP15.68■□□□□ 0.1
NEK4-203ENST00000461689 TNKSO95271 1327 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 SMIM22K7EJ46 135 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 UFL1O94874 794 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 ZNF654Q8IZM8 581 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 YEATS4O95619 227 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 SLC51AQ86UW1 340 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 NLGN1Q8N2Q7 840 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 LINC00301Q8NCQ3 95 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 KCNG4Q8TDN1 519 aa15.68■□□□□ 0.1
NEK4-203ENST00000461689 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
NEK4-203ENST00000461689 STK38Q15208 465 aa15.67■□□□□ 0.1
NEK4-203ENST00000461689 SF3A1Q15459 793 aaKnown RBP15.67■□□□□ 0.1
NEK4-203ENST00000461689 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms