RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
COPS7B-217ENST00000461350 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
COPS7B-217ENST00000461350 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-217ENST00000461350 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
COPS7B-217ENST00000461350 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
COPS7B-217ENST00000461350 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
COPS7B-217ENST00000461350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-217ENST00000461350 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
COPS7B-217ENST00000461350 PRDX5P30044 214 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 HOXA10P31260 410 aaPredicted RBP13.04□□□□□ -0.32
COPS7B-217ENST00000461350 NCBP1Q09161 790 aaKnown RBP13.04□□□□□ -0.32
COPS7B-217ENST00000461350 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 ANKRD1Q15327 319 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 DHX32Q7L7V1 743 aaKnown RBP13.04□□□□□ -0.32
COPS7B-217ENST00000461350 CCDC112Q8NEF3 446 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 SLC4A4Q9Y6R1 1079 aa13.04□□□□□ -0.32
COPS7B-217ENST00000461350 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-217ENST00000461350 NR1I2O75469 434 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 DYNLL1P63167 89 aaKnown RBP13.03□□□□□ -0.32
COPS7B-217ENST00000461350 SDR42E1Q8WUS8 393 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 BBOX1O75936 387 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 SRGNP10124 158 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 NAP1L2Q9ULW6 460 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-217ENST00000461350 GSG1L2A8MUP6 293 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-217ENST00000461350 APOBRQ0VD83 1088 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 NAA16Q6N069 864 aaPredicted RBP13.03□□□□□ -0.32
COPS7B-217ENST00000461350 IFNL3Q8IZI9 196 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
COPS7B-217ENST00000461350 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.32
COPS7B-217ENST00000461350 GOLGA6L19H0YKK7 550 aa13.02□□□□□ -0.32
COPS7B-217ENST00000461350 MECOMQ03112 1051 aa13.02□□□□□ -0.32
COPS7B-217ENST00000461350 NAPBQ9H115 298 aa13.02□□□□□ -0.32
COPS7B-217ENST00000461350 CACNA1SQ13698 1873 aa13.02□□□□□ -0.32
COPS7B-217ENST00000461350 EXOSC10Q01780 885 aaKnown RBP13.02□□□□□ -0.33
COPS7B-217ENST00000461350 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.33
COPS7B-217ENST00000461350 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
COPS7B-217ENST00000461350 NAA30Q147X3 362 aaPredicted RBP13.02□□□□□ -0.33
COPS7B-217ENST00000461350 PLA2G4DQ86XP0 818 aa13.02□□□□□ -0.33
COPS7B-217ENST00000461350 TDRD7Q8NHU6 1098 aaKnown RBP13.02□□□□□ -0.33
COPS7B-217ENST00000461350 CACTINQ8WUQ7 758 aaKnown RBP13.02□□□□□ -0.33
COPS7B-217ENST00000461350 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.33
COPS7B-217ENST00000461350 MAGEB6P1A0A0J9YX57 407 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 H3BQV1 296 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 SMIM22K7EJ46 135 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 SEMA3EO15041 775 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 KIF20AO95235 890 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 GRIK5Q16478 980 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 FEZ1Q99689 392 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
COPS7B-217ENST00000461350 TDO2P48775 406 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
COPS7B-217ENST00000461350 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-217ENST00000461350 NSUN4Q96CB9 384 aaKnown RBP13.01□□□□□ -0.33
COPS7B-217ENST00000461350 DDX11Q96FC9 970 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 ALDH8A1Q9H2A2 487 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-217ENST00000461350 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-217ENST00000461350 JAK2O60674 1132 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 PGBD1Q96JS3 809 aa13.01□□□□□ -0.33
COPS7B-217ENST00000461350 ZNF804AQ7Z570 1209 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 RAB11FIP4Q86YS3 637 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 NRXN2Q9P2S2 1712 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 NPR1P16066 1061 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 ATP2B4P23634 1241 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 FOSBP53539 338 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 CCT2P78371 535 aaKnown RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 CCDC144BQ3MJ40 725 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 ZNF771Q7L3S4 317 aaPredicted RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 CCDC144CPQ8IYA2 1237 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 AATFQ9NY61 560 aaKnown RBP eCLIP13□□□□□ -0.33
COPS7B-217ENST00000461350 OGFRQ9NZT2 677 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 COL11A2P13942 1736 aaPredicted RBP13□□□□□ -0.33
COPS7B-217ENST00000461350 NEDD4P46934 1319 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 B4E1Z4 1266 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 PRC1O43663 620 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 CHRNA5P30532 468 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 PDE6BP35913 854 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 ANTXR2P58335 489 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 NCOA7Q8NI08 942 aa13□□□□□ -0.33
COPS7B-217ENST00000461350 CD209Q9NNX6 404 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms