RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
CHRD-209ENST00000461120 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.25
CHRD-209ENST00000461120 GGA3Q9NZ52 723 aa16.64■□□□□ 0.25
CHRD-209ENST00000461120 PITPNM2Q9BZ72 1349 aa16.64■□□□□ 0.25
CHRD-209ENST00000461120 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.25
CHRD-209ENST00000461120 BAG3O95817 575 aa16.63■□□□□ 0.25
CHRD-209ENST00000461120 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
CHRD-209ENST00000461120 MIGA1Q8NAN2 632 aa16.63■□□□□ 0.25
CHRD-209ENST00000461120 ZNF408Q9H9D4 720 aa16.63■□□□□ 0.25
CHRD-209ENST00000461120 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
CHRD-209ENST00000461120 RNF186Q9NXI6 227 aa16.63■□□□□ 0.25
CHRD-209ENST00000461120 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHRD-209ENST00000461120 AK9Q5TCS8 1911 aa16.62■□□□□ 0.25
CHRD-209ENST00000461120 RHBDL3P58872 404 aa16.62■□□□□ 0.25
CHRD-209ENST00000461120 DYNLL1P63167 89 aaKnown RBP16.62■□□□□ 0.25
CHRD-209ENST00000461120 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
CHRD-209ENST00000461120 APPBP2Q92624 585 aa16.62■□□□□ 0.25
CHRD-209ENST00000461120 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
CHRD-209ENST00000461120 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
CHRD-209ENST00000461120 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
CHRD-209ENST00000461120 MAGEB6P1A0A0J9YX57 407 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 PLCG2P16885 1265 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 MNX1P50219 401 aaPredicted RBP16.61■□□□□ 0.25
CHRD-209ENST00000461120 CACNB3P54284 484 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 HUNKP57058 714 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
CHRD-209ENST00000461120 OSBP2Q969R2 916 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 CCDC102AQ96A19 550 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
CHRD-209ENST00000461120 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
CHRD-209ENST00000461120 FKBP1CQ5VVH2 108 aa16.6■□□□□ 0.25
CHRD-209ENST00000461120 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
CHRD-209ENST00000461120 ZIC5Q96T25 663 aa16.6■□□□□ 0.25
CHRD-209ENST00000461120 SCAF8Q9UPN6 1271 aaKnown RBP16.6■□□□□ 0.25
CHRD-209ENST00000461120 MKI67P46013 3256 aaKnown RBP16.6■□□□□ 0.25
CHRD-209ENST00000461120 POLR2AP24928 1970 aaKnown RBP16.59■□□□□ 0.25
CHRD-209ENST00000461120 TCP10L2B9ZVM9 353 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
CHRD-209ENST00000461120 MBD4O95243 580 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 NFIAQ12857 509 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 TEX11Q8IYF3 940 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
CHRD-209ENST00000461120 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 SEC62Q99442 399 aaKnown RBP16.59■□□□□ 0.25
CHRD-209ENST00000461120 IDI2Q9BXS1 227 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 GLIS2Q9BZE0 524 aaPredicted RBP16.59■□□□□ 0.25
CHRD-209ENST00000461120 ARMT1Q9H993 441 aa16.59■□□□□ 0.25
CHRD-209ENST00000461120 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
CHRD-209ENST00000461120 ADM5C9JUS6 153 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 M0R2C6 588 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 HIP1O00291 1037 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
CHRD-209ENST00000461120 NMIQ13287 307 aaPredicted RBP16.58■□□□□ 0.24
CHRD-209ENST00000461120 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 FAM227BQ96M60 508 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 HELLSQ9NRZ9 838 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.24
CHRD-209ENST00000461120 A0A0D9SFI3 127 aa16.57■□□□□ 0.24
CHRD-209ENST00000461120 TNNI2P48788 182 aa16.57■□□□□ 0.24
CHRD-209ENST00000461120 RASA3Q14644 834 aa16.57■□□□□ 0.24
CHRD-209ENST00000461120 RGMBQ6NW40 437 aa16.57■□□□□ 0.24
CHRD-209ENST00000461120 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
CHRD-209ENST00000461120 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
CHRD-209ENST00000461120 STRBPQ96SI9 672 aaKnown RBP16.57■□□□□ 0.24
CHRD-209ENST00000461120 CRNKL1Q9BZJ0 848 aaKnown RBP16.57■□□□□ 0.24
CHRD-209ENST00000461120 DEFB129Q9H1M3 183 aa16.57■□□□□ 0.24
CHRD-209ENST00000461120 DDX4Q9NQI0 724 aaKnown RBP16.57■□□□□ 0.24
CHRD-209ENST00000461120 GPAA1O43292 621 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 ENTPD3O75355 529 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
CHRD-209ENST00000461120 CHMLP26374 656 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 FAM151AQ8WW52 585 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 PPP2R3BQ9Y5P8 575 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 CDK5RAP2Q96SN8 1893 aa16.56■□□□□ 0.24
CHRD-209ENST00000461120 KIAA0100Q14667 2235 aaKnown RBP16.55■□□□□ 0.24
CHRD-209ENST00000461120 COL6A3P12111 3177 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 FOCADQ5VW36 1801 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 PRKAB2O43741 272 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 TCP10Q12799 353 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 PICALMQ13492 652 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 MCMDC2Q4G0Z9 681 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
CHRD-209ENST00000461120 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 ZFPM1Q8IX07 1006 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
CHRD-209ENST00000461120 FLT1P17948 1338 aa16.54■□□□□ 0.24
CHRD-209ENST00000461120 USP5P45974 858 aa16.54■□□□□ 0.24
CHRD-209ENST00000461120 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
CHRD-209ENST00000461120 CDCA5Q96FF9 252 aa16.54■□□□□ 0.24
CHRD-209ENST00000461120 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms