RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZNF654Q8IZM8 581 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 SUGCTQ9HAC7 445 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 TMEM238LA0A1B0GVL6 79 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 ARID5AQ03989 594 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 PTPN12Q05209 780 aaKnown RBP4.42□□□□□ -1.7
HPS3-203ENST00000460822 SOX4Q06945 474 aaPredicted RBP4.42□□□□□ -1.7
HPS3-203ENST00000460822 SGO2Q562F6 1265 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 INTS5Q6P9B9 1019 aaKnown RBP4.42□□□□□ -1.7
HPS3-203ENST00000460822 DTHD1Q6ZMT9 781 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 ZNF576Q9H609 170 aa4.42□□□□□ -1.7
HPS3-203ENST00000460822 USP31Q70CQ4 1352 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 FAM95CA0A1B0GW59 222 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 USP17L7P0C7H9 530 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 ITPKAP23677 461 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 IRAK1P51617 712 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 AP3B2Q13367 1082 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 TAF1CQ15572 869 aaPredicted RBP4.41□□□□□ -1.7
HPS3-203ENST00000460822 RPS26P11Q5JNZ5 115 aaPredicted RBP4.41□□□□□ -1.7
HPS3-203ENST00000460822 AKAP4Q5JQC9 854 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 PRPF40BQ6NWY9 871 aaKnown RBP4.41□□□□□ -1.7
HPS3-203ENST00000460822 DYMQ7RTS9 669 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 ARMC5Q96C12 935 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 FAM8A1Q9UBU6 413 aa4.41□□□□□ -1.7
HPS3-203ENST00000460822 WDR64B1ANS9 1081 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 PPM1GO15355 546 aaPredicted RBP4.4□□□□□ -1.7
HPS3-203ENST00000460822 B3GALT4O96024 378 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 TGFB1P01137 390 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 DRD2P14416 443 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 FCGRTP55899 365 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 PPP2R3AQ06190 1150 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 CCDC144BQ3MJ40 725 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 NXPE4Q6UWF7 544 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 SHKBP1Q8TBC3 707 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 PMFBP1Q8TBY8 1022 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 MFSD14AQ96MC6 490 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 OSBPL1AQ9BXW6 950 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 GPN3Q9UHW5 284 aaPredicted RBP4.4□□□□□ -1.7
HPS3-203ENST00000460822 AP4E1Q9UPM8 1137 aa4.4□□□□□ -1.7
HPS3-203ENST00000460822 GIPC1O14908 333 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 TIAF1O95411 115 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 ZNF157P51786 506 aaPredicted RBP4.4□□□□□ -1.71
HPS3-203ENST00000460822 MAP7Q14244 749 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 GRM2Q14416 872 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 ZDHHC13Q8IUH4 622 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 FBXL6Q8N531 539 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 FBLIM1Q8WUP2 373 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 BCO2Q9BYV7 579 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 ABCB6Q9NP58 842 aa4.4□□□□□ -1.71
HPS3-203ENST00000460822 CADPSQ9ULU8 1353 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 DLGAP3O95886 979 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 ADH5P11766 374 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 XRCC5P13010 732 aaKnown RBP4.39□□□□□ -1.71
HPS3-203ENST00000460822 TAL1P17542 331 aaPredicted RBP4.39□□□□□ -1.71
HPS3-203ENST00000460822 RAB6AP20340 208 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 GJA8P48165 433 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 ST13P50502 369 aaKnown RBP4.39□□□□□ -1.71
HPS3-203ENST00000460822 NOP9Q86U38 636 aaKnown RBP4.39□□□□□ -1.71
HPS3-203ENST00000460822 MCF2L2Q86YR7 1114 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 SRCIN1Q9C0H9 1055 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 COPRSQ9NQ92 184 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 AKAP2Q9Y2D5 859 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 LEMD3Q9Y2U8 911 aa4.39□□□□□ -1.71
HPS3-203ENST00000460822 FGRP09769 529 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 SLFN14P0C7P3 912 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 ASPAP45381 313 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 PAK2Q13177 524 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 CDPF1Q6NVV7 123 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 VPS37DQ86XT2 251 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 C2CD4AQ8NCU7 369 aaPredicted RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 TBC1D32Q96NH3 1257 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.38□□□□□ -1.71
HPS3-203ENST00000460822 ARID1BQ8NFD5 2236 aaPredicted RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 ATF4P18848 351 aaPredicted RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 RBL2Q08999 1139 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 ERMP1Q7Z2K6 904 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 TRIM56Q9BRZ2 755 aaKnown RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 METTL22Q9BUU2 404 aaPredicted RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 HIRIP3Q9BW71 556 aaPredicted RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 ZSWIM4Q9H7M6 989 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 TMEM39AQ9NV64 488 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 PIM2Q9P1W9 311 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 TMA7Q9Y2S6 64 aaKnown RBP4.38□□□□□ -1.71
HPS3-203ENST00000460822 RNF114Q9Y508 228 aa4.38□□□□□ -1.71
HPS3-203ENST00000460822 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.37□□□□□ -1.71
HPS3-203ENST00000460822 AOC2O75106 756 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 CD97P48960 835 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 DUSP27Q5VZP5 1158 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 GPRASP2Q96D09 838 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 EMILIN2Q9BXX0 1053 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 ZC3H12CQ9C0D7 883 aaKnown RBP4.37□□□□□ -1.71
HPS3-203ENST00000460822 NRSN2Q9GZP1 204 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 PIF1Q9H611 641 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 PIDD1Q9HB75 910 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 KBTBD4Q9NVX7 518 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 TTF2Q9UNY4 1162 aaKnown RBP4.37□□□□□ -1.71
HPS3-203ENST00000460822 ACTL7BQ9Y614 415 aa4.37□□□□□ -1.71
HPS3-203ENST00000460822 ANKRD62A6NC57 917 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 F6X3S4 739 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 STK10O94804 968 aaKnown RBP4.36□□□□□ -1.71
HPS3-203ENST00000460822 CTSBP07858 339 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms