RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CAMTA2O94983 1202 aa21■□□□□ 0.95
HPS3-202ENST00000460120 CYP7A1P22680 504 aa21■□□□□ 0.95
HPS3-202ENST00000460120 SYKP43405 635 aa21■□□□□ 0.95
HPS3-202ENST00000460120 SSRP1Q08945 709 aaKnown RBP21■□□□□ 0.95
HPS3-202ENST00000460120 HSP90AA4PQ58FG1 418 aa21■□□□□ 0.95
HPS3-202ENST00000460120 AKNAD1Q5T1N1 836 aa21■□□□□ 0.95
HPS3-202ENST00000460120 MARCH10Q8NA82 808 aaPredicted RBP21■□□□□ 0.95
HPS3-202ENST00000460120 TMEM87BQ96K49 555 aa21■□□□□ 0.95
HPS3-202ENST00000460120 SKILP12757 684 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 LMOD1P29536 600 aaPredicted RBP20.99■□□□□ 0.95
HPS3-202ENST00000460120 PNOCQ13519 176 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 SLC39A14Q15043 492 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 C3orf67Q6ZVT6 689 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 BCL2L12Q9HB09 334 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 IFNKQ9P0W0 207 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 CYP2D7A0A087X1C5 515 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 BTBD18B2RXH4 712 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 NTRK3Q16288 839 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 SHC4Q6S5L8 630 aa20.99■□□□□ 0.95
HPS3-202ENST00000460120 NUP98P52948 1817 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 ATRNO75882 1429 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 WDR19Q8NEZ3 1342 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 PRDM1O75626 825 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 SLC4A8Q2Y0W8 1093 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 SARM1Q6SZW1 724 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 MRFAP1L1Q96HT8 127 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 WTAPQ15007 396 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 NACAP1Q9BZK3 213 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 XPO4Q9C0E2 1151 aaKnown RBP20.98■□□□□ 0.95
HPS3-202ENST00000460120 JAG2Q9Y219 1238 aa20.98■□□□□ 0.95
HPS3-202ENST00000460120 MYH7P12883 1935 aa20.97■□□□□ 0.95
HPS3-202ENST00000460120 CMA1P23946 247 aa20.97■□□□□ 0.95
HPS3-202ENST00000460120 TMC6Q7Z403 805 aa20.97■□□□□ 0.95
HPS3-202ENST00000460120 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.97■□□□□ 0.95
HPS3-202ENST00000460120 NTSR2O95665 410 aa20.97■□□□□ 0.95
HPS3-202ENST00000460120 FOXN1O15353 648 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 GRIN1Q05586 938 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 NR5A1Q13285 461 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 ERFEQ4G0M1 354 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 ATP1A3P13637 1013 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 GTF2E1P29083 439 aaPredicted RBP20.96■□□□□ 0.95
HPS3-202ENST00000460120 CDC25BP30305 580 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 DYNLL1P63167 89 aaKnown RBP20.96■□□□□ 0.95
HPS3-202ENST00000460120 RTN1Q16799 776 aa20.96■□□□□ 0.95
HPS3-202ENST00000460120 ERICH2A1L162 156 aa20.95■□□□□ 0.94
HPS3-202ENST00000460120 NAA30Q147X3 362 aaPredicted RBP20.95■□□□□ 0.94
HPS3-202ENST00000460120 PTPAQ15257 358 aa20.95■□□□□ 0.94
HPS3-202ENST00000460120 NBPF11Q86T75 865 aa20.95■□□□□ 0.94
HPS3-202ENST00000460120 DIS3L2Q8IYB7 885 aaKnown RBP20.95■□□□□ 0.94
HPS3-202ENST00000460120 MYH3P11055 1940 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 NLRP12P59046 1061 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 EVX2Q03828 476 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 LONRF3Q496Y0 759 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 PDILTQ8N807 584 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 MAP3K14Q99558 947 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 KRT23Q9C075 422 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 SGMS1Q86VZ5 419 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 UBAC1Q9BSL1 405 aa20.94■□□□□ 0.94
HPS3-202ENST00000460120 PPARAQ07869 468 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 SART3Q15020 963 aaKnown RBP20.93■□□□□ 0.94
HPS3-202ENST00000460120 OXER1Q8TDS5 423 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 CNNM2Q9H8M5 875 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 C4AP0C0L4 1744 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 C4BP0C0L5 1744 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 ALX1Q15699 326 aa20.93■□□□□ 0.94
HPS3-202ENST00000460120 COL4A1P02462 1669 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 FMNL1O95466 1100 aaPredicted RBP20.92■□□□□ 0.94
HPS3-202ENST00000460120 TRIM22Q8IYM9 498 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 GRAMD1CQ8IYS0 662 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 CNNM3Q8NE01 707 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 KLRK1P26718 216 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 LIFRP42702 1097 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 CCZ1BP86790 482 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 CCZ1P86791 482 aaPredicted RBP20.92■□□□□ 0.94
HPS3-202ENST00000460120 GOLGA8FQ08AF8 430 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 GOLGA8DPQ0D2H9 430 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 PARP10Q53GL7 1025 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 NOSTRINQ8IVI9 506 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 JMYQ8N9B5 988 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 SPATA31A1Q5TZJ5 1347 aa20.92■□□□□ 0.94
HPS3-202ENST00000460120 MAGEB6P1A0A0J9YX57 407 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 SAFBQ15424 915 aaKnown RBP eCLIP20.91■□□□□ 0.94
HPS3-202ENST00000460120 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 ANKRD36CQ5JPF3 1778 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 FAM205CA6NFA0 338 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 GTF2F1P35269 517 aaKnown RBP eCLIP20.91■□□□□ 0.94
HPS3-202ENST00000460120 CEP135Q66GS9 1140 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 ANKRD18AQ8IVF6 992 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 ZNF654Q8IZM8 581 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 STAG1Q8WVM7 1258 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 KCNH3Q9ULD8 1083 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 U2AF2P26368 475 aaKnown RBP eCLIP20.91■□□□□ 0.946e-7■■■■□ 26.4
HPS3-202ENST00000460120 ZNF827Q17R98 1081 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 MAP7D2Q96T17 732 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.91■□□□□ 0.94
HPS3-202ENST00000460120 PCDHB6Q9Y5E3 794 aa20.91■□□□□ 0.94
HPS3-202ENST00000460120 V9GYY5 206 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms