RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 FLT3LGP49771 235 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 DIXDC1Q155Q3 683 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 C7orf61Q8IZ16 206 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 COA7Q96BR5 231 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 LRCH3Q96II8 777 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 USP40Q9NVE5 1235 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 STAP2Q9UGK3 403 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 KCNH4Q9UQ05 1017 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 LRRFIP2Q9Y608 721 aaKnown RBP9.88□□□□□ -0.83
HPS4-207ENST00000459918 ZHX2Q9Y6X8 837 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 PTPRFP10586 1907 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 ALPK3Q96L96 1907 aa9.88□□□□□ -0.83
HPS4-207ENST00000459918 LDHBP07195 334 aaKnown RBP9.87□□□□□ -0.83
HPS4-207ENST00000459918 NFIAQ12857 509 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 CDC42EP5Q6NZY7 148 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 NECAB2Q7Z6G3 386 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 SCYL3Q8IZE3 742 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 GNL3LQ9NVN8 582 aaKnown RBP9.87□□□□□ -0.83
HPS4-207ENST00000459918 DAGLAQ9Y4D2 1042 aa9.87□□□□□ -0.83
HPS4-207ENST00000459918 DDX60LQ5H9U9 1706 aaKnown RBP9.87□□□□□ -0.83
HPS4-207ENST00000459918 ATAD5Q96QE3 1844 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 TRIM75PA6NK02 468 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 SOX1O00570 391 aaPredicted RBP9.86□□□□□ -0.83
HPS4-207ENST00000459918 CXCL11O14625 94 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 BCRP11274 1271 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 PICALMQ13492 652 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 NOL9Q5SY16 702 aaKnown RBP9.86□□□□□ -0.83
HPS4-207ENST00000459918 UBE2Q1Q7Z7E8 422 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 DZIP1Q86YF9 867 aaKnown RBP9.86□□□□□ -0.83
HPS4-207ENST00000459918 WDR63Q8IWG1 891 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 ANKRD13CQ8N6S4 541 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 PAWRQ96IZ0 340 aaKnown RBP9.86□□□□□ -0.83
HPS4-207ENST00000459918 MRIQ9BWK5 157 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
HPS4-207ENST00000459918 LAMA3Q16787 3333 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 A0A0G2JLL6 359 aaPredicted RBP9.85□□□□□ -0.83
HPS4-207ENST00000459918 PRDX5P30044 214 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 RGS3P49796 1198 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 PRRT2Q7Z6L0 340 aaPredicted RBP9.85□□□□□ -0.83
HPS4-207ENST00000459918 DEFB123Q8N688 67 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 PXYLP1Q8TE99 480 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 LPIN2Q92539 896 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 KAZALD1Q96I82 304 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.85□□□□□ -0.83
HPS4-207ENST00000459918 ZNF112Q9UJU3 913 aa9.85□□□□□ -0.83
HPS4-207ENST00000459918 ZMYND8Q9ULU4 1186 aaPredicted RBP9.85□□□□□ -0.83
HPS4-207ENST00000459918 KIF16BQ96L93 1317 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 PHIPQ8WWQ0 1821 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 SYN1P17600 705 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 CAPN2P17655 700 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 PTPRAP18433 802 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 MOGSQ13724 837 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 ATP2B3Q16720 1220 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
HPS4-207ENST00000459918 GPAT2Q6NUI2 795 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 VGLL2Q8N8G2 317 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 DIS3LQ8TF46 1054 aaKnown RBP9.84□□□□□ -0.83
HPS4-207ENST00000459918 SIL1Q9H173 461 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 PRO3102Q9H379 93 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 A0A0C4DFX4 3053 aa9.84□□□□□ -0.83
HPS4-207ENST00000459918 HMGCRP04035 888 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 MNX1P50219 401 aaPredicted RBP9.83□□□□□ -0.84
HPS4-207ENST00000459918 IRF5Q13568 498 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 Q7L0L9 218 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 ZGPATQ8N5A5 531 aaKnown RBP9.83□□□□□ -0.84
HPS4-207ENST00000459918 ANKRD44Q8N8A2 993 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
HPS4-207ENST00000459918 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 HMX1Q9NP08 348 aaPredicted RBP9.83□□□□□ -0.84
HPS4-207ENST00000459918 PAK6Q9NQU5 681 aaPredicted RBP9.83□□□□□ -0.84
HPS4-207ENST00000459918 ABCF2Q9UG63 623 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 AGTPBP1Q9UPW5 1226 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 SLC45A1Q9Y2W3 748 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 LOC285556D6RIA3 1793 aa9.83□□□□□ -0.84
HPS4-207ENST00000459918 UTYO14607 1347 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 EYA2O00167 538 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 ENTPD3O75355 529 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 PABPC4Q13310 644 aaKnown RBP eCLIP9.82□□□□□ -0.84
HPS4-207ENST00000459918 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
HPS4-207ENST00000459918 ZFPM1Q8IX07 1006 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
HPS4-207ENST00000459918 ANKLE1Q8NAG6 615 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 C11orf49Q9H6J7 331 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 CWC22Q9HCG8 908 aaKnown RBP9.82□□□□□ -0.84
HPS4-207ENST00000459918 CEP126Q9P2H0 1117 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.82□□□□□ -0.84
HPS4-207ENST00000459918 DENND2AQ9ULE3 1009 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 AFG3L2Q9Y4W6 797 aa9.82□□□□□ -0.84
HPS4-207ENST00000459918 UNC80Q8N2C7 3258 aa9.81□□□□□ -0.84
HPS4-207ENST00000459918 CTNND1O60716 968 aaKnown RBP9.81□□□□□ -0.84
HPS4-207ENST00000459918 FGFR2P21802 821 aa9.81□□□□□ -0.84
HPS4-207ENST00000459918 BTDP43251 543 aa9.81□□□□□ -0.84
HPS4-207ENST00000459918 FAM110CQ1W6H9 321 aa9.81□□□□□ -0.84
HPS4-207ENST00000459918 TREML2Q5T2D2 321 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms